RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 AK8Q96MA6 479 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 ASB7Q9H672 318 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 FBRSL1Q9HCM7 1045 aaKnown RBP12.87□□□□□ -0.35
LINC00544-201ENST00000400540 AGO2Q9UKV8 859 aaKnown RBP12.87□□□□□ -0.35
LINC00544-201ENST00000400540 DSEQ9UL01 958 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 KIF3AQ9Y496 699 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 CNOT1A5YKK6 2376 aaKnown RBP12.87□□□□□ -0.35
LINC00544-201ENST00000400540 CHD6Q8TD26 2715 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 RNF40O75150 1001 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 TADA3O75528 432 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 RPP40O75818 363 aaKnown RBP12.86□□□□□ -0.35
LINC00544-201ENST00000400540 EPN2O95208 641 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 PAX3P23760 479 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 AVPR1AP37288 418 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 ST3GAL2Q16842 350 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 THEM5Q8N1Q8 247 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 RASSF8Q8NHQ8 419 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 C2orf15Q8WU43 125 aaKnown RBP12.86□□□□□ -0.35
LINC00544-201ENST00000400540 TMX3Q96JJ7 454 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 PI4K2AQ9BTU6 479 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 THG1LQ9NWX6 298 aaKnown RBP12.86□□□□□ -0.35
LINC00544-201ENST00000400540 MAGED2Q9UNF1 606 aaPredicted RBP12.86□□□□□ -0.35
LINC00544-201ENST00000400540 STYXL1Q9Y6J8 313 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 SPEGQ15772 3267 aa12.86□□□□□ -0.35
LINC00544-201ENST00000400540 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
LINC00544-201ENST00000400540 SLC26A4O43511 780 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 HCRTO43612 131 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 CCDC192P0DO97 292 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 SCP2P22307 547 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 ACAT1P24752 427 aaKnown RBP12.85□□□□□ -0.35
LINC00544-201ENST00000400540 ADSSP30520 456 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 RAP1GAPP47736 663 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 KCNA1Q09470 495 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 GRSF1Q12849 480 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00544-201ENST00000400540 BFSP1Q12934 665 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 SV2CQ496J9 727 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 USP49Q70CQ1 688 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 SFR1Q86XK3 245 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 POMGNT1Q8WZA1 660 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 LARP4BQ92615 738 aaKnown RBP12.85□□□□□ -0.35
LINC00544-201ENST00000400540 HHIPQ96QV1 700 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 TDP1Q9NUW8 608 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 PCDHB5Q9Y5E4 795 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 CEP192Q8TEP8 1941 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 ZZEF1O43149 2961 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 MYOFQ9NZM1 2061 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 CEP295Q9C0D2 2601 aa12.85□□□□□ -0.35
LINC00544-201ENST00000400540 AKAP13Q12802 2813 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
LINC00544-201ENST00000400540 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
LINC00544-201ENST00000400540 PPP1R37O75864 691 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 CYP2F1P24903 491 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 POLR2BP30876 1174 aaKnown RBP12.84□□□□□ -0.35
LINC00544-201ENST00000400540 RABEP1Q15276 862 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 DDR2Q16832 855 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 IL31Q6EBC2 164 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 OSTM1Q86WC4 334 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 DCP1BQ8IZD4 617 aaKnown RBP12.84□□□□□ -0.35
LINC00544-201ENST00000400540 PDCL2Q8N4E4 241 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 C12orf50Q8NA57 414 aaPredicted RBP12.84□□□□□ -0.35
LINC00544-201ENST00000400540 TTC16Q8NEE8 873 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
LINC00544-201ENST00000400540 SAAL1Q96ER3 474 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 ZNF560Q96MR9 790 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 SLC22A12Q96S37 553 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 ST6GALNAC4Q9H4F1 302 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 SLC8A2Q9UPR5 921 aa12.84□□□□□ -0.35
LINC00544-201ENST00000400540 ABCA7Q8IZY2 2146 aa12.83□□□□□ -0.35
LINC00544-201ENST00000400540 TM4SF5O14894 197 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 DCLK1O15075 740 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 ITGB3P05106 788 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 ZNF806P0C7X5 589 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 DDX6P26196 483 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00544-201ENST00000400540 GJA4P35212 333 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 LONP1P36776 959 aaKnown RBP12.83□□□□□ -0.36
LINC00544-201ENST00000400540 GALK1P51570 392 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 LIMK1P53667 647 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 TFAMQ00059 246 aaKnown RBP12.83□□□□□ -0.36
LINC00544-201ENST00000400540 TSPY1Q01534 308 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 SMARCB1Q12824 385 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 MTF1Q14872 753 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 PTPAQ15257 358 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 SF3A1Q15459 793 aaKnown RBP12.83□□□□□ -0.36
LINC00544-201ENST00000400540 PLA2G2CQ5R387 149 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
LINC00544-201ENST00000400540 SLFN12LQ6IEE8 588 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 TCEAL6Q6IPX3 200 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 ZNF720Q7Z2F6 126 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 MON1AQ86VX9 555 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 RPLP0P6Q8NHW5 317 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 MRPS31Q92665 395 aaKnown RBP12.83□□□□□ -0.36
LINC00544-201ENST00000400540 TCEAL3Q969E4 200 aa12.83□□□□□ -0.36
LINC00544-201ENST00000400540 EPSTI1Q96J88 318 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms