RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 MKNK1Q9BUB5 465 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SLAIN2Q9P270 581 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 PSMD13Q9UNM6 376 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 AP4B1Q9Y6B7 739 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 ANKRD26Q9UPS8 1709 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SNTNA6NMZ2 147 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SLCO1B7G3V0H7 640 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 PEX1O43933 1283 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 USP1O94782 785 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 ALBP02768 609 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 CDH2P19022 906 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 TOB1P50616 345 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 PLOD1Q02809 727 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 C6orf10Q5SRN2 563 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 KLHDC10Q6PID8 442 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 CLNKQ7Z7G1 428 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 TCAIMQ8N3R3 496 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 NOL6Q9H6R4 1146 aaKnown RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 DSEQ9UL01 958 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SIK3Q9Y2K2 1263 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 ABCC6O95255 1503 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SH3PXD2BA1X283 911 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SIN3BO75182 1162 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 TAC1P20366 129 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 CASP5P51878 434 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 HSPA2P54652 639 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 TFDP2Q14188 446 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 CHI3L2Q15782 390 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 RABL6Q3YEC7 729 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 DARS2Q6PI48 645 aaKnown RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 PDZD4Q76G19 769 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SATL1Q86VE3 508 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 PCYOX1LQ8NBM8 494 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 HM13Q8TCT9 377 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 TBCKQ8TEA7 893 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 ARHGEF1Q92888 912 aaKnown RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 HPS1Q92902 700 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 ZFYVE19Q96K21 471 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 ZNF512BQ96KM6 892 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-203ENST00000400060 GCNAQ96QF7 691 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 SCN3BQ9NY72 215 aa10.4□□□□□ -0.74
PTPRM-203ENST00000400060 FOSP01100 380 aaPredicted RBP10.4□□□□□ -0.75
PTPRM-203ENST00000400060 RBM20Q5T481 1227 aaKnown RBP10.4□□□□□ -0.75
PTPRM-203ENST00000400060 DAGLBQ8NCG7 672 aa10.4□□□□□ -0.75
PTPRM-203ENST00000400060 ANO3Q9BYT9 981 aa10.4□□□□□ -0.75
PTPRM-203ENST00000400060 FBXO9Q9UK97 447 aaPredicted RBP10.4□□□□□ -0.75
PTPRM-203ENST00000400060 WBP11Q9Y2W2 641 aaKnown RBP10.4□□□□□ -0.75
PTPRM-203ENST00000400060 TCHHQ07283 1943 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 GSTA4O15217 222 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 ZBED4O75132 1171 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 TCEA3O75764 348 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 CALB1P05937 261 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 COMTP21964 271 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 CRABP2P29373 138 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 CCNFP41002 786 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 IGBP1P78318 339 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 CTTNQ14247 550 aaKnown RBP10.39□□□□□ -0.75
PTPRM-203ENST00000400060 TXNRD1Q16881 649 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 FAAH2Q6GMR7 532 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 DGKHQ86XP1 1220 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 FLCNQ8NFG4 579 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 GJA10Q969M2 543 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 FAF2Q96CS3 445 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 MCRS1Q96EZ8 462 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 SHOC2Q9UQ13 582 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 PRAMEF22A3QJZ6 481 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 LRRIQ4A6NIV6 560 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 SAGE2PA6NJ88 616 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 TRIM24O15164 1050 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 LRRN2O75325 713 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 RAP1GAPP47736 663 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 OLR1P78380 273 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 OVGP1Q12889 678 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 ZNF829Q3KNS6 432 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-203ENST00000400060 ADGRG6Q86SQ4 1221 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 KSR1Q8IVT5 923 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 PNPT1Q8TCS8 783 aaKnown RBP10.39□□□□□ -0.75
PTPRM-203ENST00000400060 PUS3Q9BZE2 481 aaKnown RBP10.39□□□□□ -0.75
PTPRM-203ENST00000400060 KRT82Q9NSB4 513 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 APEX2Q9UBZ4 518 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 CDYLQ9Y232 598 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 COMMD10Q9Y6G5 202 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 RCCD1A6NED2 376 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 TRIM64CA6NLI5 447 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 CHEK2O96017 543 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 APOA4P06727 396 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 SERPINA6P08185 405 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 POLR2MP0CAP2 368 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 PSMA4P25789 261 aaKnown RBP10.39□□□□□ -0.75
PTPRM-203ENST00000400060 PRKCIP41743 596 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 CDK9P50750 372 aaKnown RBP10.39□□□□□ -0.75
PTPRM-203ENST00000400060 CCNG2Q16589 344 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 KHDC1Q4VXA5 237 aaKnown RBP10.39□□□□□ -0.75
PTPRM-203ENST00000400060 DNAJC24Q6P3W2 148 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 USP49Q70CQ1 688 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 PPM1NQ8N819 430 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 KYQ8NBH2 561 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 EYA3Q99504 573 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 DCUN1D5Q9BTE7 237 aa10.39□□□□□ -0.75
PTPRM-203ENST00000400060 C9orf16Q9BUW7 83 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms