RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 PRPF40AO75400 957 aaKnown RBP11.97□□□□□ -0.49
SRMP1-201ENST00000398959 PAPSS2O95340 614 aaPredicted RBP11.97□□□□□ -0.49
SRMP1-201ENST00000398959 KRT19P08727 400 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 CSH1P0DML2 217 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 CSH2P0DML3 217 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 CNR2P34972 360 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 STAT6P42226 847 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 ATXN1P54253 815 aaKnown RBP11.97□□□□□ -0.49
SRMP1-201ENST00000398959 NLRP12P59046 1061 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 MYL7Q01449 175 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 DMWDQ09019 674 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 CCINQ13939 588 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 NFE2Q16621 373 aaPredicted RBP11.97□□□□□ -0.49
SRMP1-201ENST00000398959 WDR44Q5JSH3 913 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 CCDC73Q6ZRK6 1079 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 LONP2Q86WA8 852 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 BRSK2Q8IWQ3 736 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 SYNPOQ8N3V7 929 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 ZSWIM2Q8NEG5 633 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 DNAJC19Q96DA6 116 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 STRA6Q9BX79 667 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 OLFML3Q9NRN5 406 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 GKN1Q9NS71 199 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 TMLHEQ9NVH6 421 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 DDX43Q9NXZ2 648 aaKnown RBP11.97□□□□□ -0.49
SRMP1-201ENST00000398959 THADAQ6YHU6 1953 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 CEP192Q8TEP8 1941 aa11.97□□□□□ -0.49
SRMP1-201ENST00000398959 GOLGA8IPA6NC78 632 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 GOLGA8JA6NMD2 632 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 K7ESF4 209 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 LRP3O75074 770 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 F11P03951 625 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 RETP07949 1114 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 TMEM191BP0C7N4 346 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 HMGA1P17096 107 aaKnown RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 GARTP22102 1010 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 TGM1P22735 817 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 ACAT1P24752 427 aaKnown RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 GPR15P49685 360 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 CASP5P51878 434 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 WNT7BP56706 349 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 SRSF5Q13243 272 aaKnown RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 CUL4AQ13619 759 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 ALCAMQ13740 583 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 TXNDC8Q6A555 127 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 CC2D1AQ6P1N0 951 aaPredicted RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 FAM173BQ6P4H8 233 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 CEP68Q76N32 757 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 TMEM150AQ86TG1 271 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 TMEM86AQ8N2M4 240 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 PDCL2Q8N4E4 241 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 CSGALNACT2Q8N6G5 542 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 C1orf127Q8N9H9 656 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 STKLD1Q8NE28 680 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 LEO1Q8WVC0 666 aaPredicted RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 MRPS31Q92665 395 aaKnown RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 ACBD6Q9BR61 282 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 RTKNQ9BST9 563 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 PANK2Q9BZ23 570 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 EBF3Q9H4W6 596 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 PCIF1Q9H4Z3 704 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 KIF9Q9HAQ2 790 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 TDP1Q9NUW8 608 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 PANK4Q9NVE7 773 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 UXTQ9UBK9 157 aaPredicted RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 ITGA11Q9UKX5 1188 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 L1RE1Q9UN81 338 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 CCL26Q9Y258 94 aa11.96□□□□□ -0.49
SRMP1-201ENST00000398959 R3HCC1Q9Y3T6 440 aaKnown RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.49
SRMP1-201ENST00000398959 HRO43593 1189 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 EXTL3O43909 919 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 SYT1P21579 422 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 CYP2F1P24903 491 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 RPL10AP62906 217 aaKnown RBP11.95□□□□□ -0.5
SRMP1-201ENST00000398959 AMPD2Q01433 879 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 GRSF1Q12849 480 aaKnown RBP eCLIP11.95□□□□□ -0.5
SRMP1-201ENST00000398959 RESTQ13127 1097 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 RUNX3Q13761 415 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 INTS6LQ5JSJ4 861 aaKnown RBP11.95□□□□□ -0.5
SRMP1-201ENST00000398959 SDHAF4Q5VUM1 108 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 TRIM68Q6AZZ1 485 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 LRRC52Q8N7C0 313 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 USP13Q92995 863 aaPredicted RBP11.95□□□□□ -0.5
SRMP1-201ENST00000398959 ANKRD36BP1Q96IX9 119 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 FAM83CQ9BQN1 747 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 CBWD1Q9BRT8 395 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 MTMR12Q9C0I1 747 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 TMEM206Q9H813 350 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 PDE11AQ9HCR9 933 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 TRPC7Q9HCX4 862 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 ABCB6Q9NP58 842 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 C2orf42Q9NWW7 574 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 GTF3C4Q9UKN8 822 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 SNX9Q9Y5X1 595 aa11.95□□□□□ -0.5
SRMP1-201ENST00000398959 SPTBN2O15020 2390 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 FRMD3A2A2Y4 597 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 DCDC2BA2VCK2 349 aa11.94□□□□□ -0.5
SRMP1-201ENST00000398959 SOBPA7XYQ1 873 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms