RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ZNF560Q96MR9 790 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 NOD2Q9HC29 1040 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 RNF14Q9UBS8 474 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 NDOR1Q9UHB4 597 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 HERC5Q9UII4 1024 aaKnown RBP9.74□□□□□ -0.85
ATL3-201ENST00000398868 TDRKHQ9Y2W6 561 aaKnown RBP9.74□□□□□ -0.85
ATL3-201ENST00000398868 MAGI3Q5TCQ9 1506 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 RCN1Q15293 331 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 MEI1Q5TIA1 1274 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 TPGS1Q6ZTW0 290 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 TFAP2DQ7Z6R9 452 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 PRPF39Q86UA1 669 aaKnown RBP9.74□□□□□ -0.85
ATL3-201ENST00000398868 OR8H2Q8N162 312 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 TRIM54Q9BYV2 358 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 MTMR12Q9C0I1 747 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 RSPH9Q9H1X1 276 aaPredicted RBP9.74□□□□□ -0.85
ATL3-201ENST00000398868 MAN1C1Q9NR34 630 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 PARVAQ9NVD7 372 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 ERVK-7P63135 1459 aa9.74□□□□□ -0.85
ATL3-201ENST00000398868 KPNA7A9QM74 516 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 TPST1O60507 370 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 GRIN1Q05586 938 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 ERCC6L2Q5T890 1561 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 TDRD10Q5VZ19 366 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 TRPM8Q7Z2W7 1104 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 ADAM32Q8TC27 787 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 PHF21AQ96BD5 680 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 C18orf8Q96DM3 657 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 HPDLQ96IR7 371 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 PURBQ96QR8 312 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 LOC100653049A0A140TA62 436 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 KRT34O76011 436 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 RHOBTB1O94844 696 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 CKBP12277 381 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 STOX1Q6ZVD7 989 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 UXS1Q8NBZ7 420 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 EDEM1Q92611 657 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 TMEM245Q9H330 911 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 CAMTA2O94983 1202 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 SLURP2P0DP57 97 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 LSP1P33241 339 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 TAF5Q15542 800 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 ARHGAP15Q53QZ3 475 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 ERAP2Q6P179 960 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 COG1Q8WTW3 980 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 KCNH7Q9NS40 1196 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 LIFRP42702 1097 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 OTUD4Q01804 1114 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 NOL9Q5SY16 702 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 TSSK1BQ9BXA7 367 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 FHDC1Q9C0D6 1143 aaPredicted RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 PCMTD2Q9NV79 361 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 XPO7Q9UIA9 1087 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 F8W8V4 182 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 TRDMT1O14717 391 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 APOA4P06727 396 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 GTF2A2P52657 109 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 P3H1Q32P28 736 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 IZUMO3Q5VZ72 239 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 PLEKHA7Q6IQ23 1121 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 GPAT2Q6NUI2 795 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 PTPRN2Q92932 1015 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 DDX18Q9NVP1 670 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 ARL2BPQ9Y2Y0 163 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 CYTH3O43739 400 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 PATL1Q86TB9 770 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 RAB42Q8N4Z0 105 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 GLMNQ92990 594 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 RNPC3Q96LT9 517 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 SELENONQ9NZV5 590 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 PCDHGB4Q9UN71 923 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 SLC30A1Q9Y6M5 507 aa9.73□□□□□ -0.85
ATL3-201ENST00000398868 CLTCQ00610 1675 aaKnown RBP9.73□□□□□ -0.85
ATL3-201ENST00000398868 PPP1R37O75864 691 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 MYO1DO94832 1006 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 TEDDM1Q5T9Z0 273 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 ANKS3Q6ZW76 656 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 NLRP9Q7RTR0 991 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 NT5DC3Q86UY8 548 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 CLIP3Q96DZ5 547 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 FAM20AQ96MK3 541 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 RPRD1AQ96P16 312 aaPredicted RBP9.72□□□□□ -0.85
ATL3-201ENST00000398868 DPP3Q9NY33 737 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 ERAP1Q9NZ08 941 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 CEP152O94986 1710 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 M0QYT0 321 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 TBXAS1P24557 533 aaPredicted RBP9.72□□□□□ -0.85
ATL3-201ENST00000398868 ZNF543Q08ER8 600 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 IPCEF1Q8WWN9 437 aaPredicted RBP9.72□□□□□ -0.85
ATL3-201ENST00000398868 KIF2CQ99661 725 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 MAGEB5Q9BZ81 275 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 TRABDQ9H4I3 376 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 SH3GLB2Q9NR46 395 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 SOX13Q9UN79 622 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 PCNAP12004 261 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 RBP5P82980 135 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 VPS72Q15906 364 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 ATG9AQ7Z3C6 839 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 DDHD1Q8NEL9 900 aa9.72□□□□□ -0.85
ATL3-201ENST00000398868 SCG3Q8WXD2 468 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms