RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PCDHB5Q9Y5E4 795 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 A0A1B0GVL5 298 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 KANSL1LA0AUZ9 987 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 PRPF40AO75400 957 aaKnown RBP14.4□□□□□ -0.1
VCX3A-202ENST00000398729 HAPLN1P10915 354 aaPredicted RBP14.4□□□□□ -0.1
VCX3A-202ENST00000398729 PFKFB1P16118 471 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 ATF6P18850 670 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 CD72P21854 359 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 TGM1P22735 817 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 GABRR2P28476 465 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 LHX1P48742 406 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 CYP2J2P51589 502 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 CDR1P51861 262 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 ATXN1P54253 815 aaKnown RBP14.4□□□□□ -0.1
VCX3A-202ENST00000398729 GRM2Q14416 872 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 SCARA3Q6AZY7 606 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 ADGRF2Q8IZF7 708 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 TOP6BLQ8N6T0 577 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 OR5B17Q8NGF7 314 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 GOLGA5Q8TBA6 731 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 DEPDC1BQ8WUY9 529 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 E2F7Q96AV8 911 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 LPIN3Q9BQK8 851 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 ACBD6Q9BR61 282 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 ATXN3LQ9H3M9 355 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 TRPV4Q9HBA0 871 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 ZNF334Q9HCZ1 680 aaPredicted RBP14.4□□□□□ -0.1
VCX3A-202ENST00000398729 EXOC1Q9NV70 894 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 PTPRJQ12913 1337 aa14.4□□□□□ -0.1
VCX3A-202ENST00000398729 FAM170BA6NMN3 283 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 KLRC4O43908 158 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 KINO60870 393 aaKnown RBP14.39□□□□□ -0.11
VCX3A-202ENST00000398729 MYL1P05976 194 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 DLATP10515 647 aaKnown RBP14.39□□□□□ -0.11
VCX3A-202ENST00000398729 PSMC3P17980 439 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 TNNI1P19237 187 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 PCSK1P29120 753 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 VIPR2P41587 438 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 CSTF1Q05048 431 aaKnown RBP14.39□□□□□ -0.11
VCX3A-202ENST00000398729 CYP24A1Q07973 514 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 PSMD2Q13200 908 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 FZD5Q13467 585 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 UBXN2BQ14CS0 331 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 PSMD6Q15008 389 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 ARHGAP15Q53QZ3 475 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 INTS6LQ5JSJ4 861 aaKnown RBP14.39□□□□□ -0.11
VCX3A-202ENST00000398729 VITQ6UXI7 678 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 TPRG1Q6ZUI0 275 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 GAREM2Q75VX8 874 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 DPH6Q7L8W6 267 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 C12orf56Q8IXR9 622 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 NELL1Q92832 810 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 DNASE1L2Q92874 299 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 IRF7Q92985 503 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 CCDC127Q96BQ5 260 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 GCNAQ96QF7 691 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 SCAND2PQ9GZW5 306 aaPredicted RBP14.39□□□□□ -0.11
VCX3A-202ENST00000398729 TMLHEQ9NVH6 421 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 FBXO4Q9UKT5 387 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 HPSEQ9Y251 543 aa14.39□□□□□ -0.11
VCX3A-202ENST00000398729 CNOT1A5YKK6 2376 aaKnown RBP14.38□□□□□ -0.11
VCX3A-202ENST00000398729 USP24Q9UPU5 2620 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 SHISA7A6NL88 538 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 HEPACAM2A8MVW5 462 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 GABRDO14764 452 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 EXOC3O60645 756 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 ACAT1P24752 427 aaKnown RBP14.38□□□□□ -0.11
VCX3A-202ENST00000398729 CDC25CP30307 473 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 GDI1P31150 447 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 SYKP43405 635 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 SOWAHAQ2M3V2 549 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 KMT5BQ4FZB7 885 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 STXBP5Q5T5C0 1151 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 GPR158Q5T848 1215 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 TRAPPC11Q7Z392 1133 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 MFSD6LQ8IWD5 586 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 ZBTB44Q8NCP5 570 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 CHAMP1Q96JM3 812 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 NELL2Q99435 816 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 CGRRF1Q99675 332 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 PI4K2AQ9BTU6 479 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 OSBPL6Q9BZF3 934 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 ABCB6Q9NP58 842 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 LTB4R2Q9NPC1 389 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 HEBP1Q9NRV9 189 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 SPATA6Q9NWH7 488 aaPredicted RBP14.38□□□□□ -0.11
VCX3A-202ENST00000398729 GTF3C4Q9UKN8 822 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 MIA3Q5JRA6 1907 aa14.38□□□□□ -0.11
VCX3A-202ENST00000398729 ZNF263O14978 683 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 NCAM2O15394 837 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 LAMTOR5O43504 91 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 LILRB5O75023 590 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 RPL10AP62906 217 aaKnown RBP14.37□□□□□ -0.11
VCX3A-202ENST00000398729 STK4Q13043 487 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 BECN1Q14457 450 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 ZNF852Q6ZMS4 543 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 OSTM1Q86WC4 334 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 SPATA2LQ8IUW3 424 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms