RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 ACKR2O00590 384 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 SYN3O14994 580 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 SPINT1O43278 529 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ATP9AO75110 1047 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 CRTAMO95727 393 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 EFEMP2O95967 443 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 CHRNA1P02708 482 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 THBS1P07996 1170 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ZNF286BP0CG31 522 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 CSF2RAP15509 400 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 RRM1P23921 792 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 IGFALSP35858 605 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 BMPR1AP36894 532 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PNPLA4P41247 253 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 IL2P60568 153 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 SNAP25P60880 206 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 KRT17Q04695 432 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ITIH3Q06033 890 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 DMP1Q13316 513 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 SMAD4Q13485 552 aaKnown RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 LRRC14Q15048 493 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 INF2Q27J81 1249 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 LETM2Q2VYF4 491 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 UVSSAQ2YD98 709 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ATP13A4Q4VNC1 1196 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 CDCP2Q5VXM1 449 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 EFCAB12Q6NXP0 572 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ECHDC2Q86YB7 292 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 EFHBQ8N7U6 833 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ZNF513Q8N8E2 541 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ADCY4Q8NFM4 1077 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 CDK5RAP3Q96JB5 506 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 TIGD1Q96MW7 591 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 NAP1L5Q96NT1 182 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 SLC30A3Q99726 388 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 FTOQ9C0B1 505 aaKnown RBP eCLIP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 IGFLR1Q9H665 355 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 MAN1C1Q9NR34 630 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 TRMT13Q9NUP7 481 aaKnown RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 EHD2Q9NZN4 543 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 THEGQ9P2T0 379 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 LRWD1Q9UFC0 647 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 TPX2Q9ULW0 747 aaKnown RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 STYXL1Q9Y6J8 313 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 HELZP42694 1942 aaKnown RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 DENND3A2RUS2 1198 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PRAMEF27A3QJZ7 478 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 F5H423 210 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 TIMM44O43615 452 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 TRAPPC3O43617 180 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHGA12O60330 932 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 SLITRK3O94933 977 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ASLP04424 464 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 CAPNS1P04632 268 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 HNRNPA1P09651 372 aaKnown RBP eCLIP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 FGFR1P11362 822 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 KCNE1P15382 129 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 TRIM21P19474 475 aaKnown RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PROZP22891 400 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 MTHFRP42898 656 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PDE6CP51160 858 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 CCT2P78371 535 aaKnown RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 SLC39A14Q15043 492 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PRSS53Q2L4Q9 553 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 GLB1LQ6UWU2 654 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 C16orf59Q7L2K0 433 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 RNF168Q8IYW5 571 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 BSNDQ8WZ55 320 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 MRPS27Q92552 414 aaKnown RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 COPS5Q92905 334 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 CEP170P1Q96L14 293 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ZNF558Q96NG5 402 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 HERPUD2Q9BSE4 406 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 COLEC11Q9BWP8 271 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 APOL5Q9BWW9 433 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ASB7Q9H672 318 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 RXFP1Q9HBX9 757 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 KLHL11Q9NVR0 708 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 C14orf119Q9NWQ9 140 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ARHGAP28Q9P2N2 729 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 SUCLA2Q9P2R7 463 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ZMYND8Q9ULU4 1186 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 NAP1L2Q9ULW6 460 aaPredicted RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 ANKRD6Q9Y2G4 727 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 NR2E1Q9Y466 385 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHGA9Q9Y5G4 932 aaKnown RBP4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHGA8Q9Y5G5 932 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHGA7Q9Y5G6 932 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHGA6Q9Y5G7 932 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHGA3Q9Y5H0 932 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHGA2Q9Y5H1 932 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHA9Q9Y5H5 950 aa4.1□□□□□ -1.75
UBE3A-202ENST00000397954 TCHHQ07283 1943 aa4.09□□□□□ -1.75
UBE3A-202ENST00000397954 BAZ2BQ9UIF8 2168 aaKnown RBP4.09□□□□□ -1.75
UBE3A-202ENST00000397954 A0A1B0GUA9 196 aa4.09□□□□□ -1.75
UBE3A-202ENST00000397954 LINC01553A4QN01 128 aa4.09□□□□□ -1.75
UBE3A-202ENST00000397954 H7C4K7 107 aa4.09□□□□□ -1.75
UBE3A-202ENST00000397954 EFSO43281 561 aa4.09□□□□□ -1.75
UBE3A-202ENST00000397954 EDIL3O43854 480 aa4.09□□□□□ -1.75
UBE3A-202ENST00000397954 DLX3O60479 287 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms