RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 OR4Q2P0C623 313 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 OR1D2P34982 312 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 DCP1BQ8IZD4 617 aaKnown RBP25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 MYLIPQ8WY64 445 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 LPIN3Q9BQK8 851 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 CRTAC1Q9NQ79 661 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 IRAK3Q9Y616 596 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 CHD9Q3L8U1 2897 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 HIDE1A8MVS5 230 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 ADAM12O43184 909 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 CALCAP01258 141 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 CPB1P15086 417 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 CD19P15391 556 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 KRT9P35527 623 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 ARID5AQ03989 594 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 PTPROQ16827 1216 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 MDH1BQ5I0G3 518 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 SFMBT2Q5VUG0 894 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 EMILIN2Q9BXX0 1053 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 NUCKS1Q9H1E3 243 aaKnown RBP25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 GTF3C4Q9UKN8 822 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 CDH23Q9H251 3354 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 ATG2AQ2TAZ0 1938 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 MYBPHLA2RUH7 354 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 AKR1B15C9JRZ8 316 aaPredicted RBP25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 TEX28O15482 410 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 CNPP09543 421 aaKnown RBP25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 CLCN1P35523 988 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 NDUFV1P49821 464 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 GOLGA8FQ08AF8 430 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 GOLGA8DPQ0D2H9 430 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 CCDC142Q17RM4 750 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 SLC39A12Q504Y0 691 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 SLC8B1Q6J4K2 584 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 LRRTM3Q86VH5 581 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 KLHL5Q96PQ7 755 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 PRDM12Q9H4Q4 367 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 ACP6Q9NPH0 428 aa25.11■■□□□ 1.61
TSPAN4-203ENST00000397397 MFAP3LO75121 409 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 FERP16591 822 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 ADKP55263 362 aaKnown RBP25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 BPIFB4P59827 614 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 PTK2Q05397 1052 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 ASIC2Q16515 512 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 FAM171BQ6P995 826 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 FMNL3Q8IVF7 1028 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 C12orf29Q8N999 325 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 MYCBPAPQ8TBZ2 947 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 MRPL38Q96DV4 380 aaKnown RBP25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 PKMYT1Q99640 499 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 FAM49BQ9NUQ9 324 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 TMLHEQ9NVH6 421 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 IMPACTQ9P2X3 320 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 KIAA1257Q9ULG3 409 aa25.1■■□□□ 1.61
TSPAN4-203ENST00000397397 GOLGA6L6A8MZA4 724 aa25.09■■□□□ 1.61
TSPAN4-203ENST00000397397 VDRP11473 427 aa25.09■■□□□ 1.61
TSPAN4-203ENST00000397397 GNA15P30679 374 aa25.09■■□□□ 1.61
TSPAN4-203ENST00000397397 CDR1P51861 262 aa25.09■■□□□ 1.61
TSPAN4-203ENST00000397397 ROR1Q01973 937 aa25.09■■□□□ 1.61
TSPAN4-203ENST00000397397 MAPRE1Q15691 268 aaKnown RBP25.09■■□□□ 1.61
TSPAN4-203ENST00000397397 SLC47A2Q86VL8 602 aa25.09■■□□□ 1.61
TSPAN4-203ENST00000397397 CNGA4Q8IV77 575 aa25.09■■□□□ 1.61
TSPAN4-203ENST00000397397 MYO9BQ13459 2157 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 ADH1AP07327 375 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 CCDC172P0C7W6 258 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 BRD2P25440 801 aaKnown RBP25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 KLRC2P26717 231 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 GPR17Q13304 367 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 RAB33AQ14088 237 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 SGO2Q562F6 1265 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 OR8K1Q8NGG5 319 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 MYLPFQ96A32 169 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 MED10Q9BTT4 135 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 AIPL1Q9NZN9 384 aa25.08■■□□□ 1.61
TSPAN4-203ENST00000397397 WDR27A2RRH5 827 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 THAP12O43422 761 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 CCDC130P13994 396 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 PDE6CP51160 858 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 CYP27A1Q02318 531 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 NFE2Q16621 373 aaPredicted RBP25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 TSR1Q2NL82 804 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 E4F1Q66K89 784 aaPredicted RBP25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 RNF19BQ6ZMZ0 732 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 PALB2Q86YC2 1186 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 TFAP2BQ92481 460 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 SYN2Q92777 582 aaPredicted RBP25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 CYFIP2Q96F07 1278 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 PCED1BQ96HM7 432 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 PGLYRP2Q96PD5 576 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 B3GNT5Q9BYG0 378 aa25.07■■□□□ 1.6
TSPAN4-203ENST00000397397 CYP11B1P15538 503 aa25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 PPP1R26Q5T8A7 1209 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 ARHGAP17Q68EM7 881 aa25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 C4orf50Q6ZRC1 276 aa25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 IRF2BP2Q7Z5L9 587 aa25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 SPATA2LQ8IUW3 424 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 SLC2A14Q8TDB8 520 aa25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 DNAJC7Q99615 494 aa25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 ABHD10Q9NUJ1 306 aa25.06■■□□□ 1.6
TSPAN4-203ENST00000397397 CHD7Q9P2D1 2997 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms