RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CCDC62Q6P9F0 684 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 USP37Q86T82 979 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 LARGE2Q8N3Y3 721 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
CAPN3-206ENST00000397163 TCP10LQ8TDR4 215 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 POMGNT1Q8WZA1 660 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 RIT2Q99578 217 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 MRPL47Q9HD33 250 aaKnown RBP9.64□□□□□ -0.87
CAPN3-206ENST00000397163 PCDHB2Q9Y5E7 798 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 PSMG1O95456 288 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 KRT1P04264 644 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ESRRAP11474 423 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 SERPINB3P29508 390 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MAGEA8P43361 318 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 SNRPFP62306 86 aaKnown RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 JAG1P78504 1218 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 OCRLQ01968 901 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MORF4L2Q15014 288 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 EFTUD2Q15029 972 aaKnown RBP eCLIP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 LRRC36Q1X8D7 754 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 B3GNT9Q6UX72 402 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 LRRC6Q86X45 466 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 WDR60Q8WVS4 1066 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 PTPRN2Q92932 1015 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 PHF12Q96QT6 1004 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MXRA8Q9BRK3 442 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 SYNCQ9H7C4 482 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MANSC1Q9H8J5 431 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 FBXO6Q9NRD1 293 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 KANSL3Q9P2N6 904 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 TBX20Q9UMR3 447 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MRPL11Q9Y3B7 192 aaKnown RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 SGK1O00141 431 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MAP3K7O43318 606 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 OR6B1O95007 311 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 OATP04181 439 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 SSTR1P30872 391 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ECE1P42892 770 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 QARSP47897 775 aaKnown RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MTM1Q13496 603 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 TFDP1Q14186 410 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ENOSF1Q7L5Y1 443 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 PYROXD1Q8WU10 500 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 TMEM174Q8WUU8 243 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 TSSK1BQ9BXA7 367 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 SPATA16Q9BXB7 569 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 RMI1Q9H9A7 625 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 PPCSQ9HAB8 311 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 SLC17A7Q9P2U7 560 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 DENND3A2RUS2 1198 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MAGEA13PA6NCF6 341 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MAGEB3O15480 346 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ZBED4O75132 1171 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ITGB5P18084 799 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 YWHABP31946 246 aaKnown RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 DSG3P32926 999 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 PHBP35232 272 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 GCNT1Q02742 428 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MAMLD1Q13495 774 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 HIF1AQ16665 826 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 AOC3Q16853 763 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 LMBRD2Q68DH5 695 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MFSD7Q6UXD7 560 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 MON1BQ7L1V2 547 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 SP8Q8IXZ3 490 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 TAB3Q8N5C8 712 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ALLCQ8N6M5 410 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ARL10Q8N8L6 244 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 PRR11Q96HE9 360 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ZDHHC15Q96MV8 337 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 KCNH7Q9NS40 1196 aa9.63□□□□□ -0.87
CAPN3-206ENST00000397163 ZNF189O75820 626 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-206ENST00000397163 USP1O94782 785 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 LYNP07948 512 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 GSTA2P09210 222 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 CPA2P48052 419 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 TMED1Q13445 227 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 THOC5Q13769 683 aaKnown RBP9.62□□□□□ -0.87
CAPN3-206ENST00000397163 WDR72Q3MJ13 1102 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 XKR9Q5GH70 373 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 WDR44Q5JSH3 913 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 RINLQ6ZS11 566 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 NLRX1Q86UT6 975 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 LCA5Q86VQ0 697 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 RCOR2Q8IZ40 523 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 TMC2Q8TDI7 906 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 AKT1S1Q96B36 256 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 PTCD3Q96EY7 689 aaKnown RBP9.62□□□□□ -0.87
CAPN3-206ENST00000397163 PAFAH2Q99487 392 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 TIPINQ9BVW5 301 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 TMEM120AQ9BXJ8 343 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 VCX3BQ9H321 246 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 VCX3AQ9NNX9 186 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 FOCADQ5VW36 1801 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 CFHP08603 1231 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 HOXA10P31260 410 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms