RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 MYCBPAPQ8TBZ2 947 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 KAT5Q92993 513 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 FUBP3Q96I24 572 aaKnown RBP eCLIP17.5■□□□□ 0.39
AP1S3-202ENST00000396653 GANQ9H2C0 597 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 IGFLR1Q9H665 355 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 ABCB6Q9NP58 842 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 CRTAC1Q9NQ79 661 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 MAN1C1Q9NR34 630 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 HMGXB4Q9UGU5 601 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 CNTN6Q9UQ52 1028 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 MYH10P35580 1976 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 PAPLNO95428 1278 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 VNN2O95498 520 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 UCHL3P15374 230 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 HOXA9P31269 272 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 ADCY1Q08828 1119 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 UVSSAQ2YD98 709 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 CFAP221Q4G0U5 840 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 LIN9Q5TKA1 542 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 GJB7Q6PEY0 223 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 SARM1Q6SZW1 724 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 TCEAL8Q8IYN2 117 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 NEK11Q8NG66 645 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 SHC3Q92529 594 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 TWNKQ96RR1 684 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 NAA15Q9BXJ9 866 aaKnown RBP17.49■□□□□ 0.39
AP1S3-202ENST00000396653 ELOVL4Q9GZR5 314 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 DPEP3Q9H4B8 488 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 IFNKQ9P0W0 207 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 DNAJC12Q9UKB3 198 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 GTF3C4Q9UKN8 822 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 PCDHB5Q9Y5E4 795 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 PATJQ8NI35 1801 aa17.49■□□□□ 0.39
AP1S3-202ENST00000396653 MYBPHLA2RUH7 354 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 ATP2C2O75185 946 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 NOL4O94818 638 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 POU2F2P09086 479 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 PAEPP09466 180 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 ELF1P32519 619 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 ZNF132P52740 706 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 RAD23BP54727 409 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 APBA1Q02410 837 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 MDH1BQ5I0G3 518 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 IQCEQ6IPM2 695 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 LLGL2Q6P1M3 1020 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 ACOT1Q86TX2 421 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 MAFAQ8NHW3 353 aaPredicted RBP17.48■□□□□ 0.39
AP1S3-202ENST00000396653 MYLPFQ96A32 169 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 PCED1BQ96HM7 432 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 TMEM176AQ96HP8 235 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 PCMTD1Q96MG8 357 aaPredicted RBP17.48■□□□□ 0.39
AP1S3-202ENST00000396653 SFXN1Q9H9B4 322 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 TMLHEQ9NVH6 421 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 ZDHHC7Q9NXF8 308 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 CLDND1Q9NY35 253 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 PCDHB4Q9Y5E5 795 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 FHOD1Q9Y613 1164 aa17.48■□□□□ 0.39
AP1S3-202ENST00000396653 ATP8B3O60423 1300 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 LINC01565O15544 149 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 TBX10O75333 385 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 ZMYND10O75800 440 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 C8AP07357 584 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 HNRNPA1P09651 372 aaKnown RBP eCLIP17.47■□□□□ 0.39
AP1S3-202ENST00000396653 HOXB8P17481 243 aaPredicted RBP17.47■□□□□ 0.39
AP1S3-202ENST00000396653 PBX1P40424 430 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 MAGEA11P43364 429 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 KLK7P49862 253 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 ANKRD54Q6NXT1 300 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 TMEM270Q6UE05 265 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 SPATA2LQ8IUW3 424 aaPredicted RBP17.47■□□□□ 0.39
AP1S3-202ENST00000396653 SLC4A11Q8NBS3 891 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 RBBP8NLQ8NC74 664 aaPredicted RBP17.47■□□□□ 0.39
AP1S3-202ENST00000396653 CMASQ8NFW8 434 aaPredicted RBP17.47■□□□□ 0.39
AP1S3-202ENST00000396653 IQCDQ96DY2 449 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 STK33Q9BYT3 514 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 RHOBTB2Q9BYZ6 727 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 XPO4Q9C0E2 1151 aaKnown RBP17.47■□□□□ 0.39
AP1S3-202ENST00000396653 CYP4F11Q9HBI6 524 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 FAM207AQ9NSI2 230 aaPredicted RBP17.47■□□□□ 0.39
AP1S3-202ENST00000396653 AJAP1Q9UKB5 411 aaPredicted RBP17.47■□□□□ 0.39
AP1S3-202ENST00000396653 KIAA1257Q9ULG3 409 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 C2orf16Q68DN1 1984 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 BRWD1Q9NSI6 2320 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 GREB1Q4ZG55 1949 aa17.47■□□□□ 0.39
AP1S3-202ENST00000396653 PRRG1O14668 218 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 SEC24AO95486 1093 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 HAPLN1P10915 354 aaPredicted RBP17.46■□□□□ 0.39
AP1S3-202ENST00000396653 TUFMP49411 452 aaKnown RBP17.46■□□□□ 0.39
AP1S3-202ENST00000396653 PLD1Q13393 1074 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 CCDC85BQ15834 202 aaPredicted RBP17.46■□□□□ 0.39
AP1S3-202ENST00000396653 ARHGAP44Q17R89 818 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 CCDC142Q17RM4 750 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 ZNF394Q53GI3 561 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 FIGNQ5HY92 759 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 ARHGAP17Q68EM7 881 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 VSTM1Q6UX27 236 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 CYP26C1Q6V0L0 522 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 ATAD1Q8NBU5 361 aa17.46■□□□□ 0.39
AP1S3-202ENST00000396653 SLC7A14Q8TBB6 771 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms