RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 BST2Q10589 180 aaKnown RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PPP6R3Q5H9R7 873 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ARMC3Q5W041 872 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 UIMC1Q96RL1 719 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 LACRTQ9GZZ8 138 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PTPN22Q9Y2R2 807 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PCDHA2Q9Y5H9 948 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 APOC4-APOC2K7ER74 178 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 M0QYV0 167 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 EIF3HO15372 352 aaKnown RBP eCLIP3.55□□□□□ -1.849e-7■■■■□ 25.2
VPS13C-203ENST00000395896 PPP1R11O60927 126 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 APOC2P02655 101 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MMP8P22894 467 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 HPDP32754 393 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CDH6P55285 790 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 SP3Q02447 781 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 FBXO16Q8IX29 292 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TRPM4Q8TD43 1214 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TEPSINQ96N21 525 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 KCNK9Q9NPC2 374 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 XPNPEP3Q9NQH7 507 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 DPP3Q9NY33 737 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 GOLGA8SH3BPF8 625 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PROSCO94903 275 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ITGB3P05106 788 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 EDNRBP24530 442 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TRADDQ15628 312 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 FAM187BQ17R55 369 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 SKIDA1Q1XH10 827 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF449Q6P9G9 518 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CALML6Q8TD86 181 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MTMR12Q9C0I1 747 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ZMYND15Q9H091 742 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PTPRFP10586 1907 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 H7C4K7 107 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 OPLAHO14841 1288 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 BUB1BO60566 1050 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ATG7O95352 703 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PDE1BQ01064 536 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MTF1Q14872 753 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ZSCAN26Q16670 478 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 Q3C1V9 767 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF394Q53GI3 561 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 DARS2Q6PI48 645 aaKnown RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CCNI2Q6ZMN8 369 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 SLC13A5Q86YT5 568 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CCNYQ8ND76 341 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ASAP3Q8TDY4 903 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MTBPQ96DY7 904 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 VRTNQ9H8Y1 702 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 DMAC2Q9NW81 257 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ZFATQ9P243 1243 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 KLHL8Q9P2G9 620 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MOXD2PA6NHM9 499 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TGFB1I1O43294 461 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CASP4P49662 377 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 SPARCL1Q14515 664 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 OR6B2Q6IFH4 312 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 GPAT2Q6NUI2 795 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MTHFD1LQ6UB35 978 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 HHIPL1Q96JK4 782 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 L1RE1Q9UN81 338 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TTI1O43156 1089 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TADA2AO75478 443 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 GMNNO75496 209 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 DCTN3O75935 186 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 EGFRP00533 1210 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 AGTP01019 485 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 APOA4P06727 396 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TNFRSF8P28908 595 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MIIPQ5JXC2 388 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TIGD7Q6NT04 549 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MAMDC4Q6UXC1 1216 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TLR10Q9BXR5 811 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PPANQ9NQ55 473 aaKnown RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 RAD54BQ9Y620 910 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 TMEM88BA6NKF7 163 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PGK2P07205 417 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 SCNN1AP37088 669 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 PREPLQ4J6C6 727 aaPredicted RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 NAPEPLDQ6IQ20 393 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 VSTM1Q6UX27 236 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 LRIG3Q6UXM1 1119 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC8CQ8TDW0 803 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 COLEC11Q9BWP8 271 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 EFCC1Q9HA90 598 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 GPRC5CQ9NQ84 441 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 NFU1Q9UMS0 254 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 SBF1O95248 1867 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 KPNA7A9QM74 516 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ANXA9O76027 345 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CALRP27797 417 aaKnown RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CREMQ03060 361 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 LDLRAD1Q5T700 205 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 MEI1Q5TIA1 1274 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 ZC3H3Q8IXZ2 948 aaKnown RBP3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CLEC4DQ8WXI8 215 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 VPS37BQ9H9H4 285 aa3.55□□□□□ -1.84
VPS13C-203ENST00000395896 CNGB3Q9NQW8 809 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms