RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 LRCH3Q96II8 777 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 C11orf70Q9BRQ4 267 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 DDX47Q9H0S4 455 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 RAB17Q9H0T7 212 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 SZT2Q5T011 3432 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 TCRBV5S1A1TA0A578 114 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 PHF2O75151 1096 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CALCAP01258 141 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 RPLP2P05387 115 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CFHP08603 1231 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 WEE2P0C1S8 567 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 ITGA4P13612 1032 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 SELPP16109 830 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CD58P19256 250 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 POLR2BP30876 1174 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 DRG2P55039 364 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 INCA1Q0VD86 236 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 HSP90B2PQ58FF3 399 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 RASIP1Q5U651 963 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 ALS2CLQ60I27 953 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 MMS22LQ6ZRQ5 1243 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 DEFB128Q7Z7B8 93 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 FEZF2Q8TBJ5 459 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CASKIN2Q8WXE0 1202 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 HPDLQ96IR7 371 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 PKNOX2Q96KN3 472 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 FAM114A2Q9NRY5 505 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 DPP3Q9NY33 737 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 NXF1Q9UBU9 619 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 PCYOX1Q9UHG3 505 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 IP6K2Q9UHH9 426 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CILPO75339 1184 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 PYGMP11217 842 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 GBP1P32455 592 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 MARCKSL1P49006 195 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 YARSP54577 528 aaKnown RBP15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 RAD23BP54727 409 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 MYO1EQ12965 1108 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 ZBTB6Q15916 424 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 ZNF618Q5T7W0 954 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 TAF2Q6P1X5 1199 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 PSRC1Q6PGN9 363 aaPredicted RBP15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 SND1Q7KZF4 910 aaKnown RBP eCLIP15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 LRRC8DQ7L1W4 858 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 SLC13A5Q86YT5 568 aaPredicted RBP15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 PASD1Q8IV76 773 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 RHOT1Q8IXI2 618 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 FAM71BQ8TC56 605 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 SNX27Q96L92 541 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 PPP1R16BQ96T49 567 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 FAM49AQ9H0Q0 323 aaPredicted RBP15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 WDR35Q9P2L0 1181 aa15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 CHORDC1Q9UHD1 332 aaPredicted RBP15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 UTP11Q9Y3A2 253 aaKnown RBP15.27■□□□□ 0.03
RTFDC1-203ENST00000395881 PDCD11Q14690 1871 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 TMEM191CA6NGB0 347 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 FSCN2O14926 492 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 FGBP02675 491 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 BRD2P25440 801 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 OAS2P29728 719 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 RFC2P35250 354 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 THPOP40225 353 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 FNTAP49354 379 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 CARSP49589 748 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 CRYBB1P53674 252 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 ZNF211Q13398 564 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 MBTPS1Q14703 1052 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 STILQ15468 1287 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 LRRC38Q5VT99 294 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 RUFY4Q6ZNE9 571 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 LRRC52Q8N7C0 313 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 C3orf20Q8ND61 904 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 HERVK_113Q902F9 699 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 TFAP2BQ92481 460 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 BTBD6Q96KE9 485 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 CXXC1Q9P0U4 656 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 CNTN3Q9P232 1028 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 AMACRQ9UHK6 382 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 RASAL2Q9UJF2 1139 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 BARX2Q9UMQ3 279 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 POLIQ9UNA4 740 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 AGAP1Q9UPQ3 857 aa15.26■□□□□ 0.03
RTFDC1-203ENST00000395881 PODXLO00592 558 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 NBNO60934 754 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 NPTXRO95502 500 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 VDRP11473 427 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 DR1Q01658 176 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 XKR4Q5GH76 650 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 PPP1R15BQ5SWA1 713 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 ALKAL1Q6UXT8 129 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 SCARA5Q6ZMJ2 495 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 OTOP2Q7RTS6 562 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 ERICH1Q86X53 443 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 GSPT2Q8IYD1 628 aaKnown RBP15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 KATNAL2Q8IYT4 538 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 WDTC1Q8N5D0 677 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 NIPA2Q8N8Q9 360 aa15.25■□□□□ 0.03
RTFDC1-203ENST00000395881 PRELID2Q8N945 189 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms