RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 GDF9O60383 454 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 ZSCAN22P10073 491 aaPredicted RBP14.58□□□□□ -0.08
SCAF11-203ENST00000395453 GJA1P17302 382 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 HOXD13P35453 343 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 PNPLA4P41247 253 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 TUFMP49411 452 aaKnown RBP14.58□□□□□ -0.08
SCAF11-203ENST00000395453 SMARCB1Q12824 385 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 TEAD2Q15562 447 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 SV2CQ496J9 727 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 SLC39A12Q504Y0 691 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 VITQ6UXI7 678 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 GAREM2Q75VX8 874 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 LRRTM3Q86VH5 581 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 METTL23Q86XA0 190 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 MFSD6LQ8IWD5 586 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 THEM5Q8N1Q8 247 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 C1orf127Q8N9H9 656 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 GLIS3Q8NEA6 775 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 CACTINQ8WUQ7 758 aaKnown RBP14.58□□□□□ -0.08
SCAF11-203ENST00000395453 FAM3CQ92520 227 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 IRF7Q92985 503 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 TRMT61BQ9BVS5 477 aaKnown RBP14.58□□□□□ -0.08
SCAF11-203ENST00000395453 RBAKQ9NYW8 714 aaPredicted RBP14.58□□□□□ -0.08
SCAF11-203ENST00000395453 RALYQ9UKM9 306 aaKnown RBP14.58□□□□□ -0.08
SCAF11-203ENST00000395453 RALGAPA1Q6GYQ0 2036 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 GOLGA8IPA6NC78 632 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 GOLGA8JA6NMD2 632 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 KIAA0391O15091 583 aaKnown RBP14.57□□□□□ -0.08
SCAF11-203ENST00000395453 HRO43593 1189 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 PSMC3P17980 439 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 VIPR2P41587 438 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 TFAMQ00059 246 aaKnown RBP14.57□□□□□ -0.08
SCAF11-203ENST00000395453 AMPD3Q01432 767 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 N4BP2L1Q5TBK1 243 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-203ENST00000395453 SCARA3Q6AZY7 606 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 ATL3Q6DD88 541 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 EPM2AIP1Q7L775 607 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-203ENST00000395453 LRRC52Q8N7C0 313 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 IQUBQ8NA54 791 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 ZSCAN18Q8TBC5 510 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-203ENST00000395453 C2orf15Q8WU43 125 aaKnown RBP14.57□□□□□ -0.08
SCAF11-203ENST00000395453 HPS3Q969F9 1004 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 E2F7Q96AV8 911 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 ZNF560Q96MR9 790 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 C7orf25Q9BPX7 421 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 MKNK1Q9BUB5 465 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 PCIF1Q9H4Z3 704 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 PDE11AQ9HCR9 933 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 ZNF334Q9HCZ1 680 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-203ENST00000395453 AGAP1Q9UPQ3 857 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 BOLA1Q9Y3E2 137 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 FRYQ5TBA9 3013 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 NCANO14594 1321 aa14.57□□□□□ -0.08
SCAF11-203ENST00000395453 A0A1W2PRU2 124 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 EIF3DO15371 548 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCAF11-203ENST00000395453 SOAT2O75908 522 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 FGF19O95750 216 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 F13A1P00488 732 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 ITGB3P05106 788 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 COL4A2P08572 1712 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 WEE1P30291 646 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 POLR2BP30876 1174 aaKnown RBP14.56□□□□□ -0.08
SCAF11-203ENST00000395453 LIMK1P53667 647 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 SATB1Q01826 763 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 EHHADHQ08426 723 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 COL9A2Q14055 689 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-203ENST00000395453 GRM2Q14416 872 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 STXBP4Q6ZWJ1 553 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 ITIH5Q86UX2 942 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 HSCBQ8IWL3 235 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 GPD1LQ8N335 351 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 CSGALNACT2Q8N6G5 542 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 ZNF507Q8TCN5 953 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 SPPL2BQ8TCT7 592 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 DEPDC1BQ8WUY9 529 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 DHX58Q96C10 678 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 GDAP2Q9NXN4 497 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 SIX4Q9UIU6 781 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 ITGA11Q9UKX5 1188 aa14.56□□□□□ -0.08
SCAF11-203ENST00000395453 HEPACAM2A8MVW5 462 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 CHURC1-FNTBB4DL54 471 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 ARNTLO00327 626 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 POLR2DO15514 142 aaKnown RBP14.55□□□□□ -0.08
SCAF11-203ENST00000395453 HAPLN1P10915 354 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-203ENST00000395453 ATF6P18850 670 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 GDI1P31150 447 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 FNTBP49356 437 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 MLLT6P55198 1093 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-203ENST00000395453 FCHO2Q0JRZ9 810 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 AASDHQ4L235 1098 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-203ENST00000395453 STXBP5Q5T5C0 1151 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 FOXD4L5Q5VV16 416 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-203ENST00000395453 LONP2Q86WA8 852 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 DCP1BQ8IZD4 617 aaKnown RBP14.55□□□□□ -0.08
SCAF11-203ENST00000395453 PDCL2Q8N4E4 241 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 SPEM1Q8N4L4 309 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 FOXD4L4Q8WXT5 416 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-203ENST00000395453 RSPRY1Q96DX4 576 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 ACBD6Q9BR61 282 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 MAGEF1Q9HAY2 307 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms