RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 NR2E1Q9Y466 385 aa15.02□□□□□ -0.01
CDC42SE2-202ENST00000395246 RECQL4O94761 1208 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 CYP2B6P20813 491 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 IGBP1P78318 339 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 PDCLQ13371 301 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 FBXO47Q5MNV8 452 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 TTC27Q6P3X3 843 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 OLFML1Q6UWY5 402 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 NKD2Q969F2 451 aaPredicted RBP15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 UROC1Q96N76 676 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 TCHPQ9BT92 498 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 NT5C1AQ9BXI3 368 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 WHRNQ9P202 907 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 HMGXB4Q9UGU5 601 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 FGGP02679 453 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 SKIP12755 728 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 PTPN9P43378 593 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 SP3Q02447 781 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 RAB41Q5JT25 222 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 PSTKQ8IV42 348 aaKnown RBP15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 TMEM86AQ8N2M4 240 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 CAGE1Q8TC20 777 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 OSMRQ99650 979 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 SLC38A7Q9NVC3 462 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 ANAPC7Q9UJX3 599 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 M0QZQ0 153 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 SEC31AO94979 1220 aaKnown RBP15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 RHOXF2BP0C7M4 288 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 CAPN2P17655 700 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 MATR3P43243 847 aaKnown RBP eCLIP15.01□□□□□ -0.013e-6■■■■□ 23.9
CDC42SE2-202ENST00000395246 EIF4EBP2Q13542 120 aaPredicted RBP15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 C1orf53Q5VUE5 145 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 C7orf31Q8N865 590 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 SLITRK1Q96PX8 696 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 RHOXF2Q9BQY4 288 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 SMARCAL1Q9NZC9 954 aa15.01□□□□□ -0.01
CDC42SE2-202ENST00000395246 C2CD4BA6NLJ0 364 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 SRRM3A6NNA2 597 aaPredicted RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 KRIT1O00522 736 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 NUDT17P0C025 328 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 RARBP10826 455 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 ITGA4P13612 1032 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 ATF7P17544 494 aaPredicted RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 BRD2P25440 801 aaKnown RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 KLRC2P26717 231 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 COILP38432 576 aaPredicted RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 ZNF143P52747 638 aaPredicted RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 SV2CQ496J9 727 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 MMS22LQ6ZRQ5 1243 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 HNRNPABQ99729 332 aaKnown RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 RAB17Q9H0T7 212 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 EPB41L4BQ9H329 900 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 NXF3Q9H4D5 531 aaKnown RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 CSNK1G1Q9HCP0 422 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 CEP104O60308 925 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 HEXIM1O94992 359 aaKnown RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 YARSP54577 528 aaKnown RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 CATSPER4Q7RTX7 472 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 TRMT1LQ7Z2T5 733 aaKnown RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 LENG1Q96BZ8 264 aaPredicted RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 RTP4Q96DX8 246 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 RBM41Q96IZ5 413 aaKnown RBP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 HSFY1Q96LI6 401 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 CPXM1Q96SM3 734 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 RNF186Q9NXI6 227 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 TUBGCP4Q9UGJ1 667 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 C9IYK1 514 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 MYO1FO00160 1098 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 GPR182O15218 404 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 MYL3P08590 195 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 RARAP10276 462 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 TAS2R40P59535 323 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 WDR72Q3MJ13 1102 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 SGO2Q562F6 1265 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 RSPH3Q86UC2 560 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 KIF12Q96FN5 646 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 FOXP3Q9BZS1 431 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 RGS18Q9NS28 235 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 AGAP1Q9UPQ3 857 aa15□□□□□ -0.01
CDC42SE2-202ENST00000395246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15□□□□□ -0.01
CDC42SE2-202ENST00000395246 TMCO5BA8MYB1 307 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 ATMINO43313 823 aaPredicted RBP14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 NDST1P52848 882 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 BEX3Q00994 111 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 PLCB3Q01970 1234 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 PGAP3Q96FM1 320 aaPredicted RBP14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 KRT12Q99456 494 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 DCLK3Q9C098 648 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 ELAC1Q9H777 363 aaKnown RBP14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 CDY2AQ9Y6F7 541 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 A0A0U1RQF3 1178 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 SPTLC1O15269 473 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 TCEA3O75764 348 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 CDKN2BP42772 138 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 IRX5P78411 483 aaPredicted RBP14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 ZNF200P98182 395 aaPredicted RBP14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 SOX4Q06945 474 aaPredicted RBP14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 OASLQ15646 514 aaKnown RBP14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 ANKRD52Q8NB46 1076 aa14.99□□□□□ -0.01
CDC42SE2-202ENST00000395246 HERPUD2Q9BSE4 406 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms