RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 BFSP1Q12934 665 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 DMC1Q14565 340 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 KARSQ15046 597 aaKnown RBP17.12■□□□□ 0.33
SNCA-205ENST00000394991 ZRSR1Q15695 479 aaKnown RBP17.12■□□□□ 0.33
SNCA-205ENST00000394991 HYIQ5T013 277 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 SH3PXD2AQ5TCZ1 1133 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 TXNDC8Q6A555 127 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 SYT13Q7L8C5 426 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 SYT2Q8N9I0 419 aaPredicted RBP17.12■□□□□ 0.33
SNCA-205ENST00000394991 KCNN1Q92952 543 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 FAM212AQ96EL1 285 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 PLIN2Q99541 437 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 P2RY13Q9BPV8 354 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 KIF9Q9HAQ2 790 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 TDP1Q9NUW8 608 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 ZMYM5Q9UJ78 669 aa17.12■□□□□ 0.33
SNCA-205ENST00000394991 TADA3O75528 432 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 APBB3O95704 486 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 PIGRP01833 764 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 GPR15P49685 360 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 GNL2Q13823 731 aaKnown RBP17.11■□□□□ 0.33
SNCA-205ENST00000394991 TAF12Q16514 161 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 KYAT1Q16773 422 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 SLC39A4Q6P5W5 647 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 SPPL2BQ8TCT7 592 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 TSPAN18Q96SJ8 248 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 ADAM33Q9BZ11 813 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
SNCA-205ENST00000394991 EBF1Q9UH73 591 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 KCNG1Q9UIX4 513 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 CPSF3Q9UKF6 684 aaKnown RBP17.11■□□□□ 0.33
SNCA-205ENST00000394991 INVSQ9Y283 1065 aa17.11■□□□□ 0.33
SNCA-205ENST00000394991 ANKRD11Q6UB99 2663 aaPredicted RBP17.1■□□□□ 0.33
SNCA-205ENST00000394991 PLXND1Q9Y4D7 1925 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 A0A0B4J269 797 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 PATE3B3GLJ2 98 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 HNRNPDLO14979 420 aaKnown RBP17.1■□□□□ 0.33
SNCA-205ENST00000394991 PAX3P23760 479 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNCA-205ENST00000394991 PRPHP41219 470 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 PDGFRLQ15198 375 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 FBXO43Q4G163 708 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 ARSHQ5FYA8 562 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 PMS2CLQ68D20 193 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 MON1AQ86VX9 555 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 C2orf15Q8WU43 125 aaKnown RBP17.1■□□□□ 0.33
SNCA-205ENST00000394991 GATA6Q92908 595 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
SNCA-205ENST00000394991 ECT2Q9H8V3 914 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 TMLHEQ9NVH6 421 aa17.1■□□□□ 0.33
SNCA-205ENST00000394991 CEP192Q8TEP8 1941 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 ADAMTS9Q9P2N4 1935 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 MYOFQ9NZM1 2061 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 CYB561D2O14569 222 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 CDX4O14627 284 aaPredicted RBP17.09■□□□□ 0.33
SNCA-205ENST00000394991 PLA2G4BP0C869 781 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 GBP1P32455 592 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 DGKEP52429 567 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 AMPD2Q01433 879 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 ZNF268Q14587 947 aaPredicted RBP17.09■□□□□ 0.33
SNCA-205ENST00000394991 MTF1Q14872 753 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 TMEM132DQ14C87 1099 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 SDHAF4Q5VUM1 108 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 WSCD1Q658N2 575 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 CC2D1AQ6P1N0 951 aaPredicted RBP17.09■□□□□ 0.33
SNCA-205ENST00000394991 DTHD1Q6ZMT9 781 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 METTL23Q86XA0 190 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 CD302Q8IX05 232 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 MRPS31Q92665 395 aaKnown RBP17.09■□□□□ 0.33
SNCA-205ENST00000394991 CD101Q93033 1021 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 LLPHQ9BRT6 129 aaKnown RBP17.09■□□□□ 0.33
SNCA-205ENST00000394991 MSTO1Q9BUK6 570 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 TPSD1Q9BZJ3 242 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.09■□□□□ 0.33
SNCA-205ENST00000394991 LARSQ9P2J5 1176 aaKnown RBP17.09■□□□□ 0.33
SNCA-205ENST00000394991 DSEQ9UL01 958 aa17.09■□□□□ 0.33
SNCA-205ENST00000394991 ANTXRLA6NF34 631 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 H0YCG3 227 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 LAD1O00515 517 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 CSRP1P21291 193 aaKnown RBP17.08■□□□□ 0.32
SNCA-205ENST00000394991 BCKDHBP21953 392 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 TAF6P49848 677 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 SMARCB1Q12824 385 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 USP4Q13107 963 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 ZNF77Q15935 545 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 TMEM119Q4V9L6 283 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 THEM5Q8N1Q8 247 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 CPA6Q8N4T0 437 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 ACDQ96AP0 544 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 SLC22A12Q96S37 553 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 REEP2Q9BRK0 252 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 SCNM1Q9BWG6 230 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 CCSER1Q9C0I3 900 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 TMEM9BQ9NQ34 198 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 KCND2Q9NZV8 630 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 MAGED2Q9UNF1 606 aaPredicted RBP17.08■□□□□ 0.32
SNCA-205ENST00000394991 DERAQ9Y315 318 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 WNT6Q9Y6F9 365 aa17.08■□□□□ 0.32
SNCA-205ENST00000394991 MYO18AQ92614 2054 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms