RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 FAM171BQ6P995 826 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 FAM114A1Q8IWE2 563 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 MYLPFQ96A32 169 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 FUCA2Q9BTY2 467 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 CEP72Q9P209 647 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 MAGEC2Q9UBF1 373 aaPredicted RBP21.26■□□□□ 0.99
SNCA-203ENST00000394986 MAFFQ9ULX9 164 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 C5orf42Q9H799 3197 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 PMM2O15305 246 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 XYLBO75191 536 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 ZP2Q05996 745 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 NFE2Q16621 373 aaPredicted RBP21.25■□□□□ 0.99
SNCA-203ENST00000394986 RTL10Q7L3V2 364 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 AOPEPQ8N6M6 819 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 LMO3Q8TAP4 145 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 SPPL2BQ8TCT7 592 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 RPGRIP1Q96KN7 1286 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 NECTIN4Q96NY8 510 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 TWNKQ96RR1 684 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 PHF7Q9BWX1 381 aaPredicted RBP21.25■□□□□ 0.99
SNCA-203ENST00000394986 FANCLQ9NW38 375 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 DNMT3BQ9UBC3 853 aaKnown RBP21.25■□□□□ 0.99
SNCA-203ENST00000394986 CLUHO75153 1309 aa21.25■□□□□ 0.99
SNCA-203ENST00000394986 A0A0C4DFX4 3053 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 P4HA2O15460 535 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 HAPLN1P10915 354 aaPredicted RBP21.24■□□□□ 0.99
SNCA-203ENST00000394986 PTPN1P18031 435 aaKnown RBP21.24■□□□□ 0.99
SNCA-203ENST00000394986 ATF6P18850 670 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 CYP2F1P24903 491 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 GPR15P49685 360 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 MYL5Q02045 173 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 CYP27A1Q02318 531 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 SMARCB1Q12824 385 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 SKOR2Q2VWA4 1001 aaPredicted RBP21.24■□□□□ 0.99
SNCA-203ENST00000394986 ACOT1Q86TX2 421 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 SPATA2LQ8IUW3 424 aaPredicted RBP21.24■□□□□ 0.99
SNCA-203ENST00000394986 ADHFE1Q8IWW8 467 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 B3GALNT2Q8NCR0 500 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 STKLD1Q8NE28 680 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 C2orf15Q8WU43 125 aaKnown RBP21.24■□□□□ 0.99
SNCA-203ENST00000394986 PCED1BQ96HM7 432 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 UHRF1Q96T88 793 aaPredicted RBP21.24■□□□□ 0.99
SNCA-203ENST00000394986 CRACR2AQ9BSW2 395 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 INTS2Q9H0H0 1204 aaKnown RBP21.24■□□□□ 0.99
SNCA-203ENST00000394986 CYP3A43Q9HB55 503 aa21.24■□□□□ 0.99
SNCA-203ENST00000394986 WDR6Q9NNW5 1121 aaKnown RBP21.24■□□□□ 0.99
SNCA-203ENST00000394986 MTCL1Q9Y4B5 1905 aaKnown RBP21.23■□□□□ 0.99
SNCA-203ENST00000394986 TCF20Q9UGU0 1960 aaKnown RBP21.23■□□□□ 0.99
SNCA-203ENST00000394986 LETM1O95202 739 aaPredicted RBP21.23■□□□□ 0.99
SNCA-203ENST00000394986 POU2F2P09086 479 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 PRKCSHP14314 528 aaPredicted RBP21.23■□□□□ 0.99
SNCA-203ENST00000394986 INCA1Q0VD86 236 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 MAN2A1Q16706 1144 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 ZSCAN23Q3MJ62 389 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 TCP11X2Q5H9J9 407 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 SDHAF4Q5VUM1 108 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 CDKAL1Q5VV42 579 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 CYP26C1Q6V0L0 522 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 MYCBPAPQ8TBZ2 947 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 GPR152Q8TDT2 470 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 WHAMMQ8TF30 809 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 CORO1BQ9BR76 489 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 TUBGCP2Q9BSJ2 902 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 GCNT4Q9P109 453 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 C2orf16Q68DN1 1984 aa21.23■□□□□ 0.99
SNCA-203ENST00000394986 ALDH1A3P47895 512 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 CETN1Q12798 172 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 CUL2Q13617 745 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 NCAPHQ15003 741 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 MIIPQ5JXC2 388 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 ARHGEF19Q8IW93 802 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 HS6ST3Q8IZP7 471 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 EHBP1Q8NDI1 1231 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 GIPC2Q8TF65 315 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 KAT5Q92993 513 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 ELOVL4Q9GZR5 314 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 CD320Q9NPF0 282 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 CISHQ9NSE2 258 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 TAB2Q9NYJ8 693 aa21.22■□□□□ 0.99
SNCA-203ENST00000394986 CLDN5O00501 218 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 NRG2O14511 850 aaPredicted RBP21.21■□□□□ 0.99
SNCA-203ENST00000394986 CILPO75339 1184 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 RHOP08100 348 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 BDNFP23560 247 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 TUFMP49411 452 aaKnown RBP21.21■□□□□ 0.99
SNCA-203ENST00000394986 EPHB3P54753 998 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 APBA1Q02410 837 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 DDR2Q16832 855 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 CFAP221Q4G0U5 840 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 PABPC1LQ4VXU2 614 aaKnown RBP21.21■□□□□ 0.99
SNCA-203ENST00000394986 ZNF394Q53GI3 561 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 C4orf50Q6ZRC1 276 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 GET4Q7L5D6 327 aaPredicted RBP21.21■□□□□ 0.99
SNCA-203ENST00000394986 UNC93AQ86WB7 457 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 NT5C1BQ96P26 610 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 B3GNT5Q9BYG0 378 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 ZNF518BQ9C0D4 1074 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 NDST4Q9H3R1 872 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 ABCB6Q9NP58 842 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 HSFX1Q9UBD0 423 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms