RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GPD2P43304 727 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 XYLT1Q86Y38 959 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 EXD1Q8NHP7 514 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 ART4Q93070 314 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 PIWIL1Q96J94 861 aaKnown RBP15.92■□□□□ 0.14
GPC3-202ENST00000394299 ATP6V1G3Q96LB4 118 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 SLITRK1Q96PX8 696 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 ZIC5Q96T25 663 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 LHX5Q9H2C1 402 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 SYNCQ9H7C4 482 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 ZWILCHQ9H900 591 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 METTL5Q9NRN9 209 aaKnown RBP15.92■□□□□ 0.14
GPC3-202ENST00000394299 ASIC3Q9UHC3 531 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 C2CD2Q9Y426 696 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 SNX9Q9Y5X1 595 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 PASKQ96RG2 1323 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 TRIP12Q14669 1992 aaPredicted RBP15.92■□□□□ 0.14
GPC3-202ENST00000394299 MED7O43513 233 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 IVDP26440 423 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 IL1R2P27930 398 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 ATICP31939 592 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 HPDP32754 393 aaPredicted RBP15.92■□□□□ 0.14
GPC3-202ENST00000394299 PSEN2P49810 448 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 PDE4CQ08493 712 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 FAM182AQ5T1J6 154 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 C17orf99Q6UX52 265 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 GLIS1Q8NBF1 620 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 VRTNQ9H8Y1 702 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 SAE1Q9UBE0 346 aaPredicted RBP15.92■□□□□ 0.14
GPC3-202ENST00000394299 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.92■□□□□ 0.14
GPC3-202ENST00000394299 MBLAC1A4D2B0 266 aaPredicted RBP15.91■□□□□ 0.14
GPC3-202ENST00000394299 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 MYZAPP0CAP1 466 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 DARSP14868 501 aaKnown RBP15.91■□□□□ 0.14
GPC3-202ENST00000394299 PSMA2P25787 234 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 CHKAP35790 457 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 IRAK1P51617 712 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 PDCLQ13371 301 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 SLC29A2Q14542 456 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 TAF5Q15542 800 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 SH3PXD2AQ5TCZ1 1133 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 SLC27A1Q6PCB7 646 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 LRIG3Q6UXM1 1119 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 USP6NLQ92738 828 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 CAPS2Q9BXY5 557 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 PCSK1NQ9UHG2 260 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 ITGA11Q9UKX5 1188 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 BARX2Q9UMQ3 279 aaPredicted RBP15.91■□□□□ 0.14
GPC3-202ENST00000394299 HTTP42858 3142 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 SCN1AP35498 2009 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 SMIM23A6NLE4 172 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 SIGLEC16A6NMB1 481 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 GRAP2O75791 330 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 MAN1A1P33908 653 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 RGS7P49802 495 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 GNGT1P63211 74 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 ADAM17P78536 824 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 ACOT1Q86TX2 421 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 C10orf88Q9H8K7 445 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 GOLGA2P5Q9HBQ8 144 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 DNPEPQ9ULA0 475 aa15.91■□□□□ 0.14
GPC3-202ENST00000394299 PIN4Q9Y237 131 aaKnown RBP15.91■□□□□ 0.14
GPC3-202ENST00000394299 SMIM35A0A1B0GVV1 85 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 LRRD1A4D1F6 860 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 RECQL4O94761 1208 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 ZSCAN5DPP0CG00 497 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 ETS1P14921 441 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 GUCY1A3Q02108 690 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 MTMR3Q13615 1198 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 PPP1R2P3Q6NXS1 205 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 SAPCD2Q86UD0 394 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 SESTD1Q86VW0 696 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 IFNL1Q8IU54 200 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 ATL2Q8NHH9 583 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 SNX27Q96L92 541 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 TRIM6Q9C030 488 aaPredicted RBP15.9■□□□□ 0.14
GPC3-202ENST00000394299 CYP3A43Q9HB55 503 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 AAASQ9NRG9 546 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 FAM49BQ9NUQ9 324 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 TSPAN16Q9UKR8 245 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 NOVA2Q9UNW9 492 aaKnown RBP15.9■□□□□ 0.14
GPC3-202ENST00000394299 ZSWIM8A7E2V4 1837 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 LRCH4O75427 683 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 PFKMP08237 780 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 CD48P09326 243 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 IGFBP6P24592 240 aaPredicted RBP15.9■□□□□ 0.14
GPC3-202ENST00000394299 IFFO1Q0D2I5 559 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 PIGHQ14442 188 aaPredicted RBP15.9■□□□□ 0.14
GPC3-202ENST00000394299 SNX17Q15036 470 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 CNGA2Q16280 664 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 KRT71Q3SY84 523 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 PPP1R26Q5T8A7 1209 aaPredicted RBP15.9■□□□□ 0.14
GPC3-202ENST00000394299 SPOCD1Q6ZMY3 1216 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 RCOR2Q8IZ40 523 aa15.9■□□□□ 0.14
GPC3-202ENST00000394299 PABPC3Q9H361 631 aaKnown RBP15.9■□□□□ 0.14
GPC3-202ENST00000394299 CITO14578 2027 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 TLDC2A0PJX2 215 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 VDRP11473 427 aa15.89■□□□□ 0.13
GPC3-202ENST00000394299 P4HA1P13674 534 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms