RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ASIC4Q96FT7 647 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 CEP295NLQ96MC4 621 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 GCNAQ96QF7 691 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 NXF1Q9UBU9 619 aaKnown RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 MAN1B1Q9UKM7 699 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 HCN4Q9Y3Q4 1203 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 NUMBLQ9Y6R0 609 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 NOTCH4Q99466 2003 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 MUC3AQ02505 3323 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 TECTAO75443 2155 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 BICDL2A1A5D9 508 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 ECI2O75521 394 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 CSH1P0DML2 217 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 CSH2P0DML3 217 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 ATF6P18850 670 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 ACAT1P24752 427 aaKnown RBP13.55□□□□□ -0.24
GGPS1-203ENST00000391855 CCNE1P24864 410 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 CDC25CP30307 473 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 PIK3CAP42336 1068 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 MAGEA11P43364 429 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 DLG4P78352 724 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 TAF12Q16514 161 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 FAM171BQ6P995 826 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 VSTM1Q6UX27 236 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 CLEC17AQ6ZS10 378 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 DNAJB7Q7Z6W7 309 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-203ENST00000391855 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 SLC44A3Q8N4M1 653 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 OR6B3Q8NGW1 331 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 ING5Q8WYH8 240 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 ERCC4Q92889 916 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-203ENST00000391855 PBXIP1Q96AQ6 731 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 LRRC3Q9BY71 257 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 TMEM8AQ9HCN3 771 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 SLC2A4RGQ9NR83 387 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 TMLHEQ9NVH6 421 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 GTF3C4Q9UKN8 822 aa13.55□□□□□ -0.24
GGPS1-203ENST00000391855 C5orf42Q9H799 3197 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 VNN1O95497 513 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 ASS1P00966 412 aaKnown RBP13.54□□□□□ -0.24
GGPS1-203ENST00000391855 TRIM21P19474 475 aaKnown RBP13.54□□□□□ -0.24
GGPS1-203ENST00000391855 GNL1P36915 607 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-203ENST00000391855 CCR2P41597 374 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 MORC3Q14149 939 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 ARHGAP15Q53QZ3 475 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 C1orf220Q5T0J3 134 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 KRT39Q6A163 491 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 PARM1Q6UWI2 310 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 HFE2Q6ZVN8 426 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 FBXL6Q8N531 539 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 MYCBPAPQ8TBZ2 947 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 FGF14Q92915 247 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 E2F7Q96AV8 911 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 TCEAL4Q96EI5 215 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 MCRS1Q96EZ8 462 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 DOCK6Q96HP0 2047 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 FAXDC2Q96IV6 333 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 CEP63Q96MT8 703 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 MRPL45Q9BRJ2 306 aaKnown RBP13.54□□□□□ -0.24
GGPS1-203ENST00000391855 DNAI2Q9GZS0 605 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 KCNH6Q9H252 994 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
GGPS1-203ENST00000391855 WNT16Q9UBV4 365 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 MYO10Q9HD67 2058 aa13.54□□□□□ -0.24
GGPS1-203ENST00000391855 MYBPHLA2RUH7 354 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 A8MXQ7 604 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 MOSPD3O75425 235 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 SOAT2O75908 522 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 HLA-DRAP01903 254 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
GGPS1-203ENST00000391855 GCLMP48507 274 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 MXI1P50539 228 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 PSMC1P62191 440 aaKnown RBP13.53□□□□□ -0.24
GGPS1-203ENST00000391855 PFKPQ01813 784 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 ANKRD40Q6AI12 368 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 RSAD2Q8WXG1 361 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 SMARCD2Q92925 531 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 MYLPFQ96A32 169 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 ELSPBP1Q96BH3 223 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 TNIP3Q96KP6 325 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 ASB16Q96NS5 453 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 LPIN3Q9BQK8 851 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 PI4K2AQ9BTU6 479 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 TRPV4Q9HBA0 871 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 EHD2Q9NZN4 543 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 MAGEC2Q9UBF1 373 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-203ENST00000391855 UXTQ9UBK9 157 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-203ENST00000391855 FBXL21Q9UKT6 434 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 ARIH1Q9Y4X5 557 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-203ENST00000391855 ATP8B3O60423 1300 aa13.53□□□□□ -0.24
GGPS1-203ENST00000391855 A0A1W2PRU2 124 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 TRIM66O15016 1216 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 COL9A1P20849 921 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 LMO2P25791 158 aa13.52□□□□□ -0.25
GGPS1-203ENST00000391855 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.25
GGPS1-203ENST00000391855 GABRR2P28476 465 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms