RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CUL5Q93034 780 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 DAZAP1Q96EP5 407 aaKnown RBP1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 CDK5RAP3Q96JB5 506 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 MAP3K14Q99558 947 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 SMAD5Q99717 465 aaKnown RBP1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 PTDSS2Q9BVG9 487 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 C1QTNF7Q9BXJ2 289 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 AMBRA1Q9C0C7 1298 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 PNPOQ9NVS9 261 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 PI4KBQ9UBF8 816 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 ABCF2Q9UG63 623 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 MAFFQ9ULX9 164 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 PAXBP1Q9Y5B6 917 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 PCDHA3Q9Y5H8 950 aa1.69□□□□□ -2.14
SNORD28B-201ENST00000390993 WDR27A2RRH5 827 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 KATNA1O75449 491 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 DNAJB5O75953 348 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 KIF20AO95235 890 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 THP07101 528 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 GRPP07492 148 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 RHOP08100 348 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 CHRM5P08912 532 aaPredicted RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 CYP2D6P10635 497 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 HOXB6P17509 224 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 ENGP17813 658 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PDCP20941 246 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 SCP2P22307 547 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 AKAP5P24588 427 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PRDX5P30044 214 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PPIFP30405 207 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PHKA1P46020 1223 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 KCNJ4P48050 445 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 MTHFSP49914 203 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 FXR1P51114 621 aaKnown RBP eCLIP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 HNRNPMP52272 730 aaKnown RBP eCLIP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 HK3P52790 923 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PROK1P58294 105 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 GPSM2P81274 684 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 KRT17Q04695 432 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 EIF2B5Q13144 721 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PCBP2Q15366 365 aaKnown RBP eCLIP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PGS1Q32NB8 556 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 INAVAQ3KP66 663 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 KHDC1LQ5JSQ8 128 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 TREML2Q5T2D2 321 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 ARHGAP40Q5TG30 622 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PRAMEF17Q5VTA0 474 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 TMEM108Q6UXF1 575 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 TRIM72Q6ZMU5 477 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 USP45Q70EL2 814 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PARS2Q7L3T8 475 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 TMPRSS9Q7Z410 1059 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 MRPL10Q7Z7H8 261 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 NEK8Q86SG6 692 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 GLCCI1Q86VQ1 547 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 SKAP1Q86WV1 359 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 RAB11FIP4Q86YS3 637 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 SLC15A3Q8IY34 581 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 CBARPQ8N350 705 aaPredicted RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 ZNF366Q8N895 744 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PNLDC1Q8NA58 520 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PCSK9Q8NBP7 692 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 FBXO41Q8TF61 875 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 XAGE5Q8WWM1 108 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 ANKS1AQ92625 1134 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 RFKQ969G6 155 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 CHMP4CQ96CF2 233 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 HSPBAP1Q96EW2 488 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 HMCESQ96FZ2 354 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 SLC46A1Q96NT5 459 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 ASB2Q96Q27 587 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 FYTTD1Q96QD9 318 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 FAM118BQ9BPY3 351 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 SH2D3AQ9BRG2 576 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 TTYH3Q9C0H2 523 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 MRPL46Q9H2W6 279 aaKnown RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 HOMER2Q9NSB8 354 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 TUBA8Q9NY65 449 aaPredicted RBP1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 ETAA1Q9NY74 926 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 ADAMTS5Q9UNA0 930 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 TMX2Q9Y320 296 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 PLEKHM1Q9Y4G2 1056 aa1.68□□□□□ -2.14
SNORD28B-201ENST00000390993 ZNF521Q96K83 1311 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 NT5C1B-RDH14C9J2C7 533 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 TMEM232C9JQI7 657 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 E9PLN8 166 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 POC1B-GALNT4F8VUJ3 575 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 H7C1Q1 480 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 DSCR3O14972 297 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 PPM1DO15297 605 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 PCDHGA12O60330 932 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 GCATO75600 419 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 OFD1O75665 1012 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 IGKV2-30P06310 120 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 ELFN1P0C7U0 828 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 CBSLP0DN79 551 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 PIM1P11309 404 aaPredicted RBP1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 TYRP14679 529 aa1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 LPOP22079 712 aaPredicted RBP1.67□□□□□ -2.14
SNORD28B-201ENST00000390993 EDNRBP24530 442 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms