RNA–Protein interactions for RNA: ENST00000390912.1

SNORA48B-201, Transcript of small nucleolar RNA, H/ACA box 48B, humanhuman

BASIC

Gene SNORA48B, Length 135 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48B-201ENST00000390912 IDEP14735 1019 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 HMGA1P17096 107 aaKnown RBP11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 GARTP22102 1010 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 WNT7BP56706 349 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 NLRP12P59046 1061 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 MYL7Q01449 175 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 BFSP1Q12934 665 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 SRSF5Q13243 272 aaKnown RBP11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 CUL4AQ13619 759 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 ALCAMQ13740 583 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 HEATR6Q6AI08 1181 aaKnown RBP11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 CCDC73Q6ZRK6 1079 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 TMEM86AQ8N2M4 240 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 PDCL2Q8N4E4 241 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 LRRC52Q8N7C0 313 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 MAB21L3Q8N8X9 362 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 C1orf127Q8N9H9 656 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 NETO1Q8TDF5 533 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 MRPS31Q92665 395 aaKnown RBP11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 USP13Q92995 863 aaPredicted RBP11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 DNAJC19Q96DA6 116 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 CLIC6Q96NY7 704 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 FAM83CQ9BQN1 747 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 ACBD6Q9BR61 282 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 PI4K2AQ9BTU6 479 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 ABCB6Q9NP58 842 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 GKN1Q9NS71 199 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 TMLHEQ9NVH6 421 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 C2orf42Q9NWW7 574 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 DDX43Q9NXZ2 648 aaKnown RBP11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 ITGA11Q9UKX5 1188 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 L1RE1Q9UN81 338 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 AGAP1Q9UPQ3 857 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 FRYLO94915 3013 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 SPTBN2O15020 2390 aa11.2□□□□□ -0.62
SNORA48B-201ENST00000390912 FRMD3A2A2Y4 597 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 FOXD2O60548 495 aaPredicted RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 HUS1O60921 280 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 NOL4O94818 638 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 STAT6P42226 847 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 GPR15P49685 360 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 CASP5P51878 434 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 RPL10AP62906 217 aaKnown RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 AMPD2Q01433 879 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 GRSF1Q12849 480 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 RESTQ13127 1097 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 RUNX3Q13761 415 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 ZNF268Q14587 947 aaPredicted RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 CSRP2Q16527 193 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 TMEM196Q5HYL7 178 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 INTS6LQ5JSJ4 861 aaKnown RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 TXNDC8Q6A555 127 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 CC2D1AQ6P1N0 951 aaPredicted RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 CEP68Q76N32 757 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 MON1AQ86VX9 555 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 WDR5BQ86VZ2 330 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 SYCP3Q8IZU3 236 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 SPATA18Q8TC71 538 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 TRMT2BQ96GJ1 504 aaKnown RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 EBF3Q9H4W6 596 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 TMEM206Q9H813 350 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 HPS4Q9NQG7 708 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 SEMA4GQ9NTN9 838 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 TDP1Q9NUW8 608 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 UXTQ9UBK9 157 aaPredicted RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 MAGED2Q9UNF1 606 aaPredicted RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 CCL26Q9Y258 94 aa11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 MORC2Q9Y6X9 1032 aaPredicted RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 ZNF638Q14966 1978 aaKnown RBP11.19□□□□□ -0.62
SNORA48B-201ENST00000390912 GOLGA8IPA6NC78 632 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 GOLGA8JA6NMD2 632 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 TRDMT1O14717 391 aaKnown RBP11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 EXTL3O43909 919 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 ATG13O75143 517 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 KRT19P08727 400 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 TMEM191BP0C7N4 346 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 ACAT1P24752 427 aaKnown RBP11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 CYP2F1P24903 491 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 LHX1P48742 406 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 RBP5P82980 135 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 CEBPZQ03701 1054 aaKnown RBP11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 PDGFRLQ15198 375 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 DDR2Q16832 855 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 CFAP221Q4G0U5 840 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 SDHAF4Q5VUM1 108 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 TRIM68Q6AZZ1 485 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 FSTL4Q6MZW2 842 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 FAM173BQ6P4H8 233 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 PRR23CQ6ZRP0 262 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 ADGRF2Q8IZF7 708 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 GPD1LQ8N335 351 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 CSGALNACT2Q8N6G5 542 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 TOP6BLQ8N6T0 577 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 STKLD1Q8NE28 680 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 CXorf38Q8TB03 319 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 EXOC4Q96A65 974 aa11.18□□□□□ -0.62
SNORA48B-201ENST00000390912 FUBP3Q96I24 572 aaKnown RBP eCLIP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms