RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 FAM171BQ6P995 826 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 GRASPQ7Z6J2 395 aaPredicted RBP16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 UNC93AQ86WB7 457 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 SPATA2LQ8IUW3 424 aaPredicted RBP16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 TTC39CQ8N584 583 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 TTC9BQ8N6N2 239 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 FEZF2Q8TBJ5 459 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 RPGRIP1Q96KN7 1286 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 TNIP3Q96KP6 325 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 DNAI2Q9GZS0 605 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 SDCBP2Q9H190 292 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 CRISPLD1Q9H336 500 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 FAM124BQ9H5Z6 455 aaPredicted RBP16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 TMLHEQ9NVH6 421 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 GTF3C4Q9UKN8 822 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 USTQ9Y2C2 406 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 SLC27A5Q9Y2P5 690 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 NFE2L3Q9Y4A8 694 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 DENND4AQ7Z401 1863 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 MYBPHLA2RUH7 354 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 ATP2C2O75185 946 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 HAPLN1P10915 354 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 INCA1Q0VD86 236 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 VEPH1Q14D04 833 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 CFAP221Q4G0U5 840 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 PABPC1LQ4VXU2 614 aaKnown RBP16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 C11orf57Q6ZUT1 292 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 OTOP3Q7RTS5 596 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 IRF2BP1Q8IU81 584 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 TDRD5Q8NAT2 981 aaKnown RBP16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 B3GALNT2Q8NCR0 500 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 MYCBPAPQ8TBZ2 947 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 MYLPFQ96A32 169 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 ACSF2Q96CM8 615 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 ZNF512Q96ME7 567 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 NECAB3Q96P71 396 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 NAT10Q9H0A0 1025 aaKnown RBP16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 CRTAC1Q9NQ79 661 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 ASB3Q9Y575 518 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 NME7Q9Y5B8 376 aa16.04■□□□□ 0.16
IGHV3-53-201ENST00000390627 LRRN2O75325 713 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 PTPN2P17706 415 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 PTPN1P18031 435 aaKnown RBP16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 FSHRP23945 695 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 TBXAS1P24557 533 aaPredicted RBP16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 NDST1P52848 882 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 CYP27A1Q02318 531 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 MAN2A1Q16706 1144 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 ITIH5Q86UX2 942 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 GJD3Q8N144 294 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 LEMD2Q8NC56 503 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 PCED1BQ96HM7 432 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 DNAJC25Q9H1X3 360 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 DPEP3Q9H4B8 488 aa16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 AVENQ9NQS1 362 aaPredicted RBP16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 DNMT3BQ9UBC3 853 aaKnown RBP16.03■□□□□ 0.16
IGHV3-53-201ENST00000390627 ATP8B3O60423 1300 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 C19orf67A6NJJ6 358 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 KCNJ18B7U540 433 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 LOC730098B7Z3J9 87 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 SOAT2O75908 522 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 RHOP08100 348 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 CD58P19256 250 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 SP100P23497 879 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 EEF1GP26641 437 aaKnown RBP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 MAGEA11P43364 429 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 CDR1P51861 262 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 YWHAEP62258 255 aaKnown RBP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 RPL10AP62906 217 aaKnown RBP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 MYL5Q02045 173 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 CUL2Q13617 745 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 KCNJ12Q14500 433 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 CCDC142Q17RM4 750 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 CYP4A22Q5TCH4 519 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 VSTM1Q6UX27 236 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 PDZD4Q76G19 769 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 GET4Q7L5D6 327 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 TATDN2Q93075 761 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 PSMG2Q969U7 264 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 CORO1BQ9BR76 489 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 NT5C1AQ9BXI3 368 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 COL25A1Q9BXS0 654 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 ELOVL4Q9GZR5 314 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 ASAH2Q9NR71 780 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 SAMSN1Q9NSI8 373 aaKnown RBP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 HCFC1R1Q9NWW0 138 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 CEP72Q9P209 647 aa16.02■□□□□ 0.16
IGHV3-53-201ENST00000390627 C2CD4DB7Z1M9 353 aa16.01■□□□□ 0.15
IGHV3-53-201ENST00000390627 ZNF197O14709 1029 aa16.01■□□□□ 0.15
IGHV3-53-201ENST00000390627 CILPO75339 1184 aa16.01■□□□□ 0.15
IGHV3-53-201ENST00000390627 PRKCSHP14314 528 aaPredicted RBP16.01■□□□□ 0.15
IGHV3-53-201ENST00000390627 ATF6P18850 670 aa16.01■□□□□ 0.15
IGHV3-53-201ENST00000390627 CYP2F1P24903 491 aa16.01■□□□□ 0.15
IGHV3-53-201ENST00000390627 GBP2P32456 591 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms