RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 MBD1Q9UIS9 605 aaPredicted RBP3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 CROTQ9UKG9 612 aa3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 TMPRSS11EQ9UL52 423 aa3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 ZNF215Q9UL58 517 aaPredicted RBP3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 ZNF214Q9UL59 606 aaPredicted RBP3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 LIPT1Q9Y234 373 aa3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 TNFSF13BQ9Y275 285 aa3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 KLHL20Q9Y2M5 609 aa3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 ATP6V1DQ9Y5K8 247 aa3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 SNX13Q9Y5W8 968 aa3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 CYP46A1Q9Y6A2 500 aa3.6□□□□□ -1.83
TRAJ17-201ENST00000390520 CCDC78A2IDD5 438 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 A4D1N5 150 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 H0YCG3 227 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 GOLGA8SH3BPF8 625 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CDK2AP1O14519 115 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CXCL11O14625 94 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 VILLO15195 856 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CD3EAPO15446 510 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ADAM20O43506 726 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ZPR1O75312 459 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PAGE1O75459 146 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 GGPS1O95749 300 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ECDO95905 644 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ITGAVP06756 1048 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ENO2P09104 434 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PRG2P13727 222 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 KRT4P19013 534 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TM4SF1P30408 202 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 HOXA6P31267 233 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CCR1P32246 355 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 IL13P35225 146 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 BMI1P35226 326 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SLC16A2P36021 539 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 MAP2K2P36507 400 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PPARGP37231 505 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ETV3P41162 512 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CASP3P42574 277 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 MAGEA4P43358 317 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PIP4K2AP48426 406 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 NT5C2P49902 561 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ZNF81P51508 661 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ARHGDIBP52566 201 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SEC24CP53992 1094 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ATXN3P54252 364 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 POLE2P56282 527 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SLC8A3P57103 927 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 RAC3P60763 192 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 EIF4A1P60842 406 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 DSTNP60981 165 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TRA2BP62995 288 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ERVK-9P63128 1117 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 UBE2IP63279 158 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 MRPS5P82675 430 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 EXOSC9Q06265 439 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 MPP3Q13368 585 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ITGA7Q13683 1181 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 DAG1Q14118 895 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 GNA13Q14344 377 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TIGD6Q17RP2 521 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 GLRA4Q5JXX5 417 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 C1orf185Q5T7R7 199 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 RNASEH2BQ5TBB1 312 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 GARNL3Q5VVW2 1013 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 BROXQ5VW32 411 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PEAR1Q5VY43 1037 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 NFRKBQ6P4R8 1299 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CNKSR3Q6P9H4 555 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 AAGABQ6PD74 315 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ZCCHC12Q6PEW1 402 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TRAT1Q6PIZ9 186 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SLC30A9Q6PML9 568 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SEZ6L2Q6UXD5 910 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 RNF19BQ6ZMZ0 732 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ARHGAP36Q6ZRI8 547 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 BBS12Q6ZW61 710 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 UBE3BQ7Z3V4 1068 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 PXKQ7Z7A4 578 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TTC7BQ86TV6 843 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TLK2Q86UE8 772 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CDH24Q86UP0 819 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ZNF227Q86WZ6 799 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 COL23A1Q86Y22 540 aaPredicted RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 LIX1LQ8IVB5 337 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 DENND6AQ8IWF6 608 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TRIM59Q8IWR1 403 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SCN4BQ8IWT1 228 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TUSC5Q8IXB3 177 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TAGAPQ8N103 731 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CARFQ8N187 725 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 RNF10Q8N5U6 811 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 RTL3Q8N8U3 475 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 FAM133AQ8N9E0 248 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 ZNF565Q8N9K5 539 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 TDRD5Q8NAT2 981 aaKnown RBP3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 SMYD1Q8NB12 490 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 RNF214Q8ND24 703 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 GANCQ8TET4 914 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 HASPINQ8TF76 798 aa3.59□□□□□ -1.83
TRAJ17-201ENST00000390520 CACTINQ8WUQ7 758 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms