RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 DDR2Q16832 855 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 CCDC142Q17RM4 750 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 WDR44Q5JSH3 913 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 Q6ZS52 159 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 ERMP1Q7Z2K6 904 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 TMEM150AQ86TG1 271 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 CMTM8Q8IZV2 173 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 GPD1LQ8N335 351 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 CELF5Q8N6W0 485 aaKnown RBP11.51□□□□□ -0.57
TRAV4-201ENST00000390426 LRRC52Q8N7C0 313 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 MAB21L3Q8N8X9 362 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 CXorf38Q8TB03 319 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 DHX58Q96C10 678 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 MSANTD3Q96H12 275 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 IER2Q9BTL4 223 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 FAM126AQ9BYI3 521 aaPredicted RBP11.51□□□□□ -0.57
TRAV4-201ENST00000390426 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 MTMR12Q9C0I1 747 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 EPC1Q9H2F5 836 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 GKN1Q9NS71 199 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 THG1LQ9NWX6 298 aaKnown RBP11.51□□□□□ -0.57
TRAV4-201ENST00000390426 SIX4Q9UIU6 781 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 GTF3C4Q9UKN8 822 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 ITGA11Q9UKX5 1188 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 SNX9Q9Y5X1 595 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 ZNF292O60281 2723 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 ZNF233A6NK53 670 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 HCRTO43612 131 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 CSH1P0DML2 217 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 CSH2P0DML3 217 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 NLRP12P59046 1061 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 RPL10AP62906 217 aaKnown RBP11.5□□□□□ -0.57
TRAV4-201ENST00000390426 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 DMWDQ09019 674 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 PPP2R5DQ14738 602 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 NFE2Q16621 373 aaPredicted RBP11.5□□□□□ -0.57
TRAV4-201ENST00000390426 INTS6LQ5JSJ4 861 aaKnown RBP11.5□□□□□ -0.57
TRAV4-201ENST00000390426 TXNDC8Q6A555 127 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 C1orf228Q6PIY5 440 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 RALGPS2Q86X27 583 aaPredicted RBP11.5□□□□□ -0.57
TRAV4-201ENST00000390426 TMEM86AQ8N2M4 240 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 SPEM1Q8N4L4 309 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 OR5B17Q8NGF7 314 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 SECISBP2LQ93073 1101 aaKnown RBP11.5□□□□□ -0.57
TRAV4-201ENST00000390426 ANKRD36BP1Q96IX9 119 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 ZNF396Q96N95 335 aaPredicted RBP11.5□□□□□ -0.57
TRAV4-201ENST00000390426 ACBD6Q9BR61 282 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 GDAP2Q9NXN4 497 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 CCL26Q9Y258 94 aa11.5□□□□□ -0.57
TRAV4-201ENST00000390426 R3HCC1Q9Y3T6 440 aaKnown RBP11.5□□□□□ -0.57
TRAV4-201ENST00000390426 CHURC1-FNTBB4DL54 471 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 HOXC13P31276 330 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 AVPR1AP37288 418 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 FNTBP49356 437 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 ASIC1P78348 528 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 E2F4Q16254 413 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 RSPO4Q2I0M5 234 aaPredicted RBP11.49□□□□□ -0.57
TRAV4-201ENST00000390426 SOWAHAQ2M3V2 549 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 ITPRIPL2Q3MIP1 535 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 FOXD4L6Q3SYB3 417 aaPredicted RBP11.49□□□□□ -0.57
TRAV4-201ENST00000390426 DGKKQ5KSL6 1271 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 HEATR6Q6AI08 1181 aaKnown RBP11.49□□□□□ -0.57
TRAV4-201ENST00000390426 TRIM68Q6AZZ1 485 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 FOXD4L3Q6VB84 417 aaPredicted RBP11.49□□□□□ -0.57
TRAV4-201ENST00000390426 STXBP4Q6ZWJ1 553 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 DGLUCYQ7Z3D6 616 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 CBWD2Q8IUF1 395 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 SPATA2LQ8IUW3 424 aaPredicted RBP11.49□□□□□ -0.57
TRAV4-201ENST00000390426 SCN4BQ8IWT1 228 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 LEO1Q8WVC0 666 aaPredicted RBP11.49□□□□□ -0.57
TRAV4-201ENST00000390426 MRPS31Q92665 395 aaKnown RBP11.49□□□□□ -0.57
TRAV4-201ENST00000390426 USP13Q92995 863 aaPredicted RBP11.49□□□□□ -0.57
TRAV4-201ENST00000390426 PKMYT1Q99640 499 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 TRIM9Q9C026 710 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 LRRC27Q9C0I9 530 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 TNMDQ9H2S6 317 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 INTS13Q9NVM9 706 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 KBTBD4Q9NVX7 518 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 C2orf42Q9NWW7 574 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 RAB23Q9ULC3 237 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 PTPRJQ12913 1337 aa11.49□□□□□ -0.57
TRAV4-201ENST00000390426 TCHHQ07283 1943 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 MYO15AQ9UKN7 3530 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 GABRDO14764 452 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 KIAA0391O15091 583 aaKnown RBP11.48□□□□□ -0.57
TRAV4-201ENST00000390426 HRO43593 1189 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 PPP6R2O75170 966 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 ATP2C2O75185 946 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 TNNC2P02585 160 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 DDX6P26196 483 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAV4-201ENST00000390426 PCSK1P29120 753 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 HOXD13P35453 343 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 LHX1P48742 406 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 MYO1EQ12965 1108 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 SRSF5Q13243 272 aaKnown RBP11.48□□□□□ -0.57
TRAV4-201ENST00000390426 RUNX3Q13761 415 aa11.48□□□□□ -0.57
TRAV4-201ENST00000390426 PUM1Q14671 1186 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms