RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 CMTM8Q8IZV2 173 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 THEM5Q8N1Q8 247 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 SPEM1Q8N4L4 309 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 GLIS3Q8NEA6 775 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 PI4K2AQ9BTU6 479 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 HPS4Q9NQG7 708 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 RBAKQ9NYW8 714 aaPredicted RBP11.89□□□□□ -0.51
TRAV3-201ENST00000390425 SIX4Q9UIU6 781 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 AGAP1Q9UPQ3 857 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 EXOC7Q9UPT5 735 aa11.89□□□□□ -0.51
TRAV3-201ENST00000390425 OTOL1A6NHN0 477 aaPredicted RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 CHURC1-FNTBB4DL54 471 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 DPYSL4O14531 572 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 EXTL3O43909 919 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 IDEP14735 1019 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 GARTP22102 1010 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 ACAT1P24752 427 aaKnown RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 TXLNAP40222 546 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 PNPLA4P41247 253 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 STAT6P42226 847 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 CXCL12P48061 93 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 FNTBP49356 437 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 TSPY1Q01534 308 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 SMARCB1Q12824 385 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 SRSF5Q13243 272 aaKnown RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 LRRC32Q14392 662 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 SLC39A14Q15043 492 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 INTS6LQ5JSJ4 861 aaKnown RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 LMBRD2Q68DH5 695 aaPredicted RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 PKN3Q6P5Z2 889 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 C1orf228Q6PIY5 440 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 CCDC73Q6ZRK6 1079 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 DCP1BQ8IZD4 617 aaKnown RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 USP13Q92995 863 aaPredicted RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 HPS3Q969F9 1004 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 FAM83CQ9BQN1 747 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 PANK2Q9BZ23 570 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 MTMR12Q9C0I1 747 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 PDE11AQ9HCR9 933 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 DDX43Q9NXZ2 648 aaKnown RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 PCDHB5Q9Y5E4 795 aa11.88□□□□□ -0.51
TRAV3-201ENST00000390425 MAP1BP46821 2468 aaKnown RBP11.88□□□□□ -0.51
TRAV3-201ENST00000390425 NUP205Q92621 2012 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 MYH10P35580 1976 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 HRO43593 1189 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 PRPF40AO75400 957 aaKnown RBP11.87□□□□□ -0.51
TRAV3-201ENST00000390425 NOL4O94818 638 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 HOXD13P35453 343 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 NASPP49321 788 aaPredicted RBP11.87□□□□□ -0.51
TRAV3-201ENST00000390425 BFSP1Q12934 665 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 ALCAMQ13740 583 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 E2F4Q16254 413 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
TRAV3-201ENST00000390425 ITPRIPL2Q3MIP1 535 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 DGKKQ5KSL6 1271 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 TXNDC8Q6A555 127 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 TRIM68Q6AZZ1 485 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 CELF5Q8N6W0 485 aaKnown RBP11.87□□□□□ -0.51
TRAV3-201ENST00000390425 LRRC52Q8N7C0 313 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 PDILTQ8N807 584 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 MAB21L3Q8N8X9 362 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 GCNAQ96QF7 691 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 PCIF1Q9H4Z3 704 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 PANK4Q9NVE7 773 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 GDAP2Q9NXN4 497 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 ITGA11Q9UKX5 1188 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
TRAV3-201ENST00000390425 MYO18AQ92614 2054 aaKnown RBP11.87□□□□□ -0.51
TRAV3-201ENST00000390425 GABRDO14764 452 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 HUS1O60921 280 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 LDHAP00338 332 aaKnown RBP11.86□□□□□ -0.51
TRAV3-201ENST00000390425 ARSAP15289 507 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 CYP2F1P24903 491 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 NRLP54845 237 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 SPEM2Q0P670 501 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 PPP2R5DQ14738 602 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 TAF12Q16514 161 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 DDR2Q16832 855 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 NAIF1Q69YI7 327 aaPredicted RBP11.86□□□□□ -0.51
TRAV3-201ENST00000390425 LAIR1Q6GTX8 287 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 FSTL4Q6MZW2 842 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 LIMS2Q7Z4I7 341 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 MON1AQ86VX9 555 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 CBWD2Q8IUF1 395 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 ADGRF2Q8IZF7 708 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 SYCP3Q8IZU3 236 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 GPD1LQ8N335 351 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 GPR161Q8N6U8 529 aaKnown RBP11.86□□□□□ -0.51
TRAV3-201ENST00000390425 OR5B17Q8NGF7 314 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 KBTBD7Q8WVZ9 684 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 INTS4Q96HW7 963 aaKnown RBP11.86□□□□□ -0.51
TRAV3-201ENST00000390425 SLC22A12Q96S37 553 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 ACBD6Q9BR61 282 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 ABCB6Q9NP58 842 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 GKN1Q9NS71 199 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
TRAV3-201ENST00000390425 INTS13Q9NVM9 706 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms