RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 IPCEF1Q8WWN9 437 aaPredicted RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 ANKS1AQ92625 1134 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 FBXL20Q96IG2 436 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 C22orf23Q9BZE7 217 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 ZNF518BQ9C0D4 1074 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 SCAND2PQ9GZW5 306 aaPredicted RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 PCED1AQ9H1Q7 454 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 TOR3AQ9H497 397 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 AFF4Q9UHB7 1163 aaKnown RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 A0A087X1B8 175 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 FOXN1O15353 648 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 AKAP8O43823 692 aaKnown RBP4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 MAST3O60307 1309 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 ZFPL1O95159 310 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 ZKSCAN1P17029 563 aaPredicted RBP4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 ARFIP2P53365 341 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 UCP3P55916 312 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 CNGA2Q16280 664 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 MGAT5BQ3V5L5 792 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 RBM20Q5T481 1227 aaKnown RBP4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 TMEM108Q6UXF1 575 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 ZNF627Q7L945 461 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 SLC15A4Q8N697 577 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 DNAJC5GQ8N7S2 189 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 BEND2Q8NDZ0 799 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 SMCR8Q8TEV9 937 aaPredicted RBP4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 FAM136AQ96C01 138 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 TIFAQ96CG3 184 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 APIPQ96GX9 242 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 SORCS2Q96PQ0 1159 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 PTDSS2Q9BVG9 487 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 ALG8Q9BVK2 526 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 ACTRT3Q9BYD9 372 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 ATP6V0A4Q9HBG4 840 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 A1CFQ9NQ94 594 aaKnown RBP4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 SACM1LQ9NTJ5 587 aa4.08□□□□□ -1.76
RNU6-39P-201ENST00000384344 A0A087WWL8 130 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 GRID2IPA4D2P6 1211 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 A6NNZ2 444 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 MYO1FO00160 1098 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 TBX3O15119 743 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 PROM1O43490 865 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 NBPF7P0C2Y1 421 aaPredicted RBP4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 MYF5P13349 255 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 PPP3CBP16298 524 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 GATA3P23771 443 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 PPIFP30405 207 aaKnown RBP4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 FOLR3P41439 243 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 HMGA2P52926 109 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 SEC24CP53992 1094 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 SUMO3P55854 103 aaPredicted RBP4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 LILRA4P59901 499 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 PURAQ00577 322 aaKnown RBP4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 SCAPQ12770 1279 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 E2F2Q14209 437 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 ICE2Q659A1 982 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 CCSAPQ6IQ19 270 aaPredicted RBP4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 SWSAP1Q6NVH7 229 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 VWA1Q6PCB0 445 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 TMPRSS9Q7Z410 1059 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 C11orf96Q7Z7L8 435 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 SLC30A5Q8TAD4 765 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 ACTRT2Q8TDY3 377 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 LINC00476Q8WZB0 136 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 LRIG1Q96JA1 1093 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 MRIQ9BWK5 157 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 DPH1Q9BZG8 443 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 MS4A7Q9GZW8 240 aaPredicted RBP4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 BTBD1Q9H0C5 482 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 BHMT2Q9H2M3 363 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 SMOC2Q9H3U7 446 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 SNX13Q9Y5W8 968 aa4.07□□□□□ -1.76
RNU6-39P-201ENST00000384344 MBD3L4A6NDZ8 208 aaPredicted RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 MBD3L3A6NE82 208 aaPredicted RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 MPPED1O15442 326 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 PLIN1O60240 522 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 TLR5O60602 858 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 PQBP1O60828 265 aaKnown RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 RASSF9O75901 435 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 INMTO95050 263 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 NXPH3O95157 252 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 MYL1P05976 194 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 KLRC1P26715 233 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 CXCR5P32302 372 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 GNALP38405 381 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 PRKAG1P54619 331 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 CTBP1Q13363 440 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 SEMA5AQ13591 1074 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 PTPRRQ15256 657 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 SAFBQ15424 915 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 INSCQ1MX18 579 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 COBLL1Q53SF7 1204 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 PLAC9Q5JTB6 97 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 KAZNQ674X7 775 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 KSR2Q6VAB6 950 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 LDLRAD3Q86YD5 345 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 MYCBPAPQ8TBZ2 947 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 FBXO41Q8TF61 875 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 ATRIPQ8WXE1 791 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 LPIN2Q92539 896 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms