RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 GOLGA8JA6NMD2 632 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 PAPSS2O95340 614 aaPredicted RBP28.4■■■□□ 2.14
NPHP3-202ENST00000383282 KRT19P08727 400 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 NLRP12P59046 1061 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 TNK2Q07912 1038 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 BFSP1Q12934 665 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 SLC39A14Q15043 492 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 LAIR1Q6GTX8 287 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 STXBP4Q6ZWJ1 553 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 CCDC65Q8IXS2 484 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 SYNPOQ8N3V7 929 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 MAB21L3Q8N8X9 362 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 ZSWIM2Q8NEG5 633 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 MRPS31Q92665 395 aaKnown RBP28.4■■■□□ 2.14
NPHP3-202ENST00000383282 INTS4Q96HW7 963 aaKnown RBP28.4■■■□□ 2.14
NPHP3-202ENST00000383282 USP28Q96RU2 1077 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 SMG9Q9H0W8 520 aaKnown RBP28.4■■■□□ 2.14
NPHP3-202ENST00000383282 ZSCAN16Q9H4T2 348 aaPredicted RBP28.4■■■□□ 2.14
NPHP3-202ENST00000383282 TMLHEQ9NVH6 421 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 L1RE1Q9UN81 338 aa28.4■■■□□ 2.14
NPHP3-202ENST00000383282 MAGED2Q9UNF1 606 aaPredicted RBP28.4■■■□□ 2.14
NPHP3-202ENST00000383282 TMEM191BP0C7N4 346 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 CNR2P34972 360 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 RPL10AP62906 217 aaKnown RBP28.39■■■□□ 2.14
NPHP3-202ENST00000383282 RBP5P82980 135 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 LPAL2Q16609 132 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 Q6ZS52 159 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 SPATA18Q8TC71 538 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 CBWD1Q9BRT8 395 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 PCIF1Q9H4Z3 704 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 KIF9Q9HAQ2 790 aa28.39■■■□□ 2.14
NPHP3-202ENST00000383282 UXTQ9UBK9 157 aaPredicted RBP28.39■■■□□ 2.14
NPHP3-202ENST00000383282 TCHHQ07283 1943 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 SOBPA7XYQ1 873 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 KIAA0391O15091 583 aaKnown RBP28.38■■■□□ 2.13
NPHP3-202ENST00000383282 PRPF6O94906 941 aaKnown RBP28.38■■■□□ 2.13
NPHP3-202ENST00000383282 F11P03951 625 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 HMGA1P17096 107 aaKnown RBP28.38■■■□□ 2.13
NPHP3-202ENST00000383282 SIM2Q14190 667 aaPredicted RBP28.38■■■□□ 2.13
NPHP3-202ENST00000383282 INTS6LQ5JSJ4 861 aaKnown RBP28.38■■■□□ 2.13
NPHP3-202ENST00000383282 LONP2Q86WA8 852 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 GPD1LQ8N335 351 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 PDILTQ8N807 584 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 ANKRD36BP1Q96IX9 119 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 LRRC27Q9C0I9 530 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 ABCB6Q9NP58 842 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 GKN1Q9NS71 199 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 SNX9Q9Y5X1 595 aa28.38■■■□□ 2.13
NPHP3-202ENST00000383282 MED19A0JLT2 244 aaPredicted RBP28.37■■■□□ 2.13
NPHP3-202ENST00000383282 CHURC1-FNTBB4DL54 471 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 LHX1P48742 406 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 FNTBP49356 437 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 GPR15P49685 360 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 CCINQ13939 588 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 TMEM150AQ86TG1 271 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 TOP6BLQ8N6T0 577 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 FGFBP2Q9BYJ0 223 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 MTMR12Q9C0I1 747 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 PDE11AQ9HCR9 933 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 TDP1Q9NUW8 608 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 GDAP2Q9NXN4 497 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 CDV3Q9UKY7 258 aaKnown RBP28.37■■■□□ 2.13
NPHP3-202ENST00000383282 MTMR6Q9Y217 621 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 CACNA1AO00555 2505 aa28.37■■■□□ 2.13
NPHP3-202ENST00000383282 DNAH14Q0VDD8 3507 aa28.36■■■□□ 2.13
NPHP3-202ENST00000383282 A0A087X0B3 334 aa28.36■■■□□ 2.13
NPHP3-202ENST00000383282 ACAT1P24752 427 aaKnown RBP28.36■■■□□ 2.13
NPHP3-202ENST00000383282 PCSK1P29120 753 aa28.36■■■□□ 2.13
NPHP3-202ENST00000383282 RUNX3Q13761 415 aa28.36■■■□□ 2.13
NPHP3-202ENST00000383282 STK38Q15208 465 aa28.36■■■□□ 2.13
NPHP3-202ENST00000383282 WDR44Q5JSH3 913 aa28.36■■■□□ 2.13
NPHP3-202ENST00000383282 TXNDC8Q6A555 127 aa28.36■■■□□ 2.13
NPHP3-202ENST00000383282 CC2D1AQ6P1N0 951 aaPredicted RBP28.36■■■□□ 2.13
NPHP3-202ENST00000383282 ADGRF2Q8IZF7 708 aa28.36■■■□□ 2.13
NPHP3-202ENST00000383282 K7ESF4 209 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 RETP07949 1114 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 AMPD2Q01433 879 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 MYO1EQ12965 1108 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 SURF1Q15526 300 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 DDR2Q16832 855 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 SDHAF4Q5VUM1 108 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 SPATA2LQ8IUW3 424 aaPredicted RBP28.35■■■□□ 2.13
NPHP3-202ENST00000383282 USP13Q92995 863 aaPredicted RBP28.35■■■□□ 2.13
NPHP3-202ENST00000383282 FAM83CQ9BQN1 747 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 TNMDQ9H2S6 317 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 GTF3C4Q9UKN8 822 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 CCL26Q9Y258 94 aa28.35■■■□□ 2.13
NPHP3-202ENST00000383282 CEP250Q9BV73 2442 aa28.34■■■□□ 2.13
NPHP3-202ENST00000383282 STX6O43752 255 aa28.34■■■□□ 2.13
NPHP3-202ENST00000383282 CYP2F1P24903 491 aa28.34■■■□□ 2.13
NPHP3-202ENST00000383282 NASPP49321 788 aaPredicted RBP28.34■■■□□ 2.13
NPHP3-202ENST00000383282 SPEM2Q0P670 501 aa28.34■■■□□ 2.13
NPHP3-202ENST00000383282 GRSF1Q12849 480 aaKnown RBP eCLIP28.34■■■□□ 2.13
NPHP3-202ENST00000383282 HEATR6Q6AI08 1181 aaKnown RBP28.34■■■□□ 2.13
NPHP3-202ENST00000383282 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.34■■■□□ 2.13
NPHP3-202ENST00000383282 MON1AQ86VX9 555 aa28.34■■■□□ 2.13
NPHP3-202ENST00000383282 STKLD1Q8NE28 680 aa28.34■■■□□ 2.13
NPHP3-202ENST00000383282 CXorf38Q8TB03 319 aa28.34■■■□□ 2.13
NPHP3-202ENST00000383282 FOXD4L1Q9NU39 408 aa28.34■■■□□ 2.13
NPHP3-202ENST00000383282 SIX4Q9UIU6 781 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms