RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 CEP70Q8NHQ1 597 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 SYTL5Q8TDW5 730 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 NT5C1AQ9BXI3 368 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 AGO4Q9HCK5 861 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 ACP6Q9NPH0 428 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 OGTO15294 1046 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 SNX3O60493 162 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 KLHL2O95198 593 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 TXNP10599 105 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 PRPF39Q86UA1 669 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 MTDHQ86UE4 582 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 UBA3Q8TBC4 463 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 SH3GL3Q99963 347 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 MTMR12Q9C0I1 747 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 ABCF3Q9NUQ8 709 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 SLC12A6Q9UHW9 1150 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 FAM208AQ9UK61 1670 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 MRC1P22897 1456 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 LOC100653049A0A140TA62 436 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 C19orf81C9J6K1 198 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 KRT34O76011 436 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 LCA5LO95447 670 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 CYP3A4P08684 503 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 SLC12A1Q13621 1099 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 TRIP10Q15642 601 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 MTHFD1LQ6UB35 978 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 APOBEC3FQ8IUX4 373 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 FAM193BQ96PV7 902 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 FGFBP2Q9BYJ0 223 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 TRPV6Q9H1D0 765 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 KCNQ5Q9NR82 932 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 SHOC2Q9UQ13 582 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 AGPSO00116 658 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 MARCKSL1P49006 195 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 SOX10P56693 466 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 KYAT1Q16773 422 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 FASTKD1Q53R41 847 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 TWF2Q6IBS0 349 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 KCNK16Q96T55 309 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 MRPL40Q9NQ50 206 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 AVENQ9NQS1 362 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 FAM49BQ9NUQ9 324 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 PCYOX1Q9UHG3 505 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 CPSF3Q9UKF6 684 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 DNAJC8O75937 253 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 VIL1P09327 827 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 NUDT17P0C025 328 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 PAPOLAP51003 745 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 AUHQ13825 339 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 KCNV1Q6PIU1 500 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 NAF1Q96HR8 494 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 CCDC138Q96M89 665 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 PCDH9Q9HC56 1237 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 CAMTA1Q9Y6Y1 1673 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 NOL4O94818 638 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 MAP3K6O95382 1288 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 PECAM1P16284 738 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 VCPP55072 806 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 DLG4P78352 724 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 KCTD19Q17RG1 926 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 ARSHQ5FYA8 562 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 ALG3Q92685 438 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 MKL1Q969V6 931 aa13.29□□□□□ -0.28
DNMT3A-204ENST00000380756 GNGT2O14610 69 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 IL18RAPO95256 599 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 NAMPTP43490 491 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 RRP1BQ14684 758 aaKnown RBP13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 ZNF606Q8WXB4 792 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 CMTM5Q96DZ9 223 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 IDI2Q9BXS1 227 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 FRMD8P1Q9BZ68 369 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 ZNF518BQ9C0D4 1074 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 MAP3K20Q9NYL2 800 aaKnown RBP13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 NCANO14594 1321 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 DNALI1O14645 258 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 SPATA31C1P0DKV0 1188 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 CNGA2Q16280 664 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 CNGA3Q16281 694 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 HYIQ5T013 277 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 STYK1Q6J9G0 422 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 TTC8Q8TAM2 541 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 ZKSCAN4Q969J2 545 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 CGRRF1Q99675 332 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 ANGPTL3Q9Y5C1 460 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 RNF103-CHMP3A0A140T963 221 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 SPDYE2BA6NHP3 402 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 GOLGA8CPA6NN73 597 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 NEMP1O14524 444 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 TGFB1I1O43294 461 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 CHEK2O96017 543 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 SPDYE6P0CI01 402 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 MYL2P10916 166 aa13.28□□□□□ -0.28
DNMT3A-204ENST00000380756 DRD4P21917 467 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms