RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 DMC1Q14565 340 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 LINC00523Q86TU6 105 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 RIC8BQ9NVN3 520 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 CD274Q9NZQ7 290 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 ITGB3P05106 788 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 FDFT1P37268 417 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 PCYT1AP49585 367 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 AASDHQ4L235 1098 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 PRPF39Q86UA1 669 aaKnown RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 ARID3BQ8IVW6 561 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 RAET1EQ8TD07 263 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 PNKPQ96T60 521 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 LBHD1Q9BQE6 289 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 DEFB129Q9H1M3 183 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 SLC39A10Q9ULF5 831 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 ARHGEF9O43307 516 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 HNRNPRO43390 633 aaKnown RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 ZC3H11AO75152 810 aaKnown RBP eCLIP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 MED24O75448 989 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 NCAM1P13591 858 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 PTRHD1Q6GMV3 140 aaKnown RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 RBM43Q6ZSC3 357 aaKnown RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 SLC25A41Q8N5S1 370 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 STKLD1Q8NE28 680 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 MUC3BQ9H195 1237 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 SUPT3HB4E1H0 165 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 PJA2O43164 708 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 APOA4P06727 396 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 GZMAP12544 262 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 KCNA3P22001 575 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 DAB2IPQ5VWQ8 1189 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 STYK1Q6J9G0 422 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 C3orf20Q8ND61 904 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 TFB1MQ8WVM0 346 aaKnown RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 UBQLN1Q9UMX0 589 aaKnown RBP16.71■□□□□ 0.27
COL2A1-202ENST00000380518 LOC100653049A0A140TA62 436 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 SPDYE5A6NIY4 337 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 CFAP99D6REC4 459 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 KRT34O76011 436 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 ANXA9O76027 345 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 EPHB2P29323 1055 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 SPDYE7PQ495Y7 208 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 STX19Q8N4C7 294 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 MDM1Q8TC05 714 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 MYOZ2Q9NPC6 264 aa16.71■□□□□ 0.27
COL2A1-202ENST00000380518 IGF2BP3O00425 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 RPS12P25398 132 aaKnown RBP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 DGKDQ16760 1214 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 CAPN6Q9Y6Q1 641 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 TCF7P36402 384 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 TWF1Q12792 350 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 PAPD7Q5XG87 772 aaKnown RBP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 CHSY1Q86X52 802 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 CBWD2Q8IUF1 395 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 TMCO5AQ8N6Q1 288 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 SEPT5Q99719 369 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 KIAA1257Q9ULG3 409 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 RSPH10B2B2RC85 870 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 DEAF1O75398 565 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 RSPH10BP0C881 870 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 ATICP31939 592 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 FBXW4P57775 412 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 CCNJLQ8IV13 435 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 GPRC5AQ8NFJ5 357 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 ZMAT2Q96NC0 199 aaKnown RBP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 FUT8Q9BYC5 575 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 SGPL1O95470 568 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 NPTXRO95502 500 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 SREBF1P36956 1147 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-202ENST00000380518 ARHGEF7Q14155 803 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 FAM83EQ2M2I3 478 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 TEX9Q8N6V9 391 aa16.7■□□□□ 0.26
COL2A1-202ENST00000380518 E2F8A0AVK6 867 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 STK25O00506 426 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 CLASP2O75122 1294 aaKnown RBP16.69■□□□□ 0.26
COL2A1-202ENST00000380518 RALBP11234 206 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 RARGP13631 454 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 FBXO28Q9NVF7 368 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 TMEM161AQ9NX61 479 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 TBC1D4O60343 1298 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 GARTP22102 1010 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 KCNK10P57789 538 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 PKN3Q6P5Z2 889 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 LRRC34Q8IZ02 419 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 AGBL3Q8NEM8 1001 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 SLITRK1Q96PX8 696 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 TRPC5OSA6NMA1 111 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 MAPRE1Q15691 268 aaKnown RBP16.69■□□□□ 0.26
COL2A1-202ENST00000380518 MGAT5BQ3V5L5 792 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 SLC40A1Q9NP59 571 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 FKBP9O95302 570 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 CYP11B1P15538 503 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 CYP2B6P20813 491 aa16.69■□□□□ 0.26
COL2A1-202ENST00000380518 GMPSP49915 693 aaPredicted RBP16.69■□□□□ 0.26
COL2A1-202ENST00000380518 MEI1Q5TIA1 1274 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms