RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ZFYVE19Q96K21 471 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 COPG2Q9UBF2 871 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 SNX13Q9Y5W8 968 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 AQP5P55064 265 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 ADARP55265 1226 aaKnown RBP17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 TP53BP2Q13625 1128 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 ZNF235Q14590 738 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 CCDC81Q6ZN84 652 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 PGM2Q96G03 612 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 DBNDD1Q9H9R9 158 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 UNC13BO14795 1591 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 SKAP2O75563 359 aaPredicted RBP17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 GPD1P21695 349 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 PON1P27169 355 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 RGS2P41220 211 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 PPIDQ08752 370 aaKnown RBP17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 PPP1R16BQ96T49 567 aa17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 DMGDHQ9UI17 866 aaKnown RBP17.78■□□□□ 0.44
COL4A3BP-203ENST00000380494 CRKP46108 304 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 ZNF844Q08AG5 666 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 TBX2Q13207 712 aaPredicted RBP17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 PDPK2PQ6A1A2 396 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 TMC5Q6UXY8 1006 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 EFHBQ8N7U6 833 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 FBXO36Q8NEA4 188 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 TMEM161AQ9NX61 479 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 TUBGCP4Q9UGJ1 667 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 A0A087X0T9 212 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 NBPF26B4DH59 902 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 FAM228BP0C875 321 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 RBP3P10745 1247 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 ARPP19P56211 112 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 NCOA4Q13772 614 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 SMAD1Q15797 465 aaKnown RBP17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 EZH2Q15910 746 aaKnown RBP17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 CCDC142Q17RM4 750 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 C11orf63Q6NUN7 778 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 TMC3Q7Z5M5 1100 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 LINC00523Q86TU6 105 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 NBPF15Q8N660 670 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 FAM71DQ8N9W8 422 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 AGBL1Q96MI9 1066 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 PAFAH2Q99487 392 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 PDZK1P1A8MUH7 402 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 DGAT1O75907 488 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 LCP1P13796 627 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 TPP2P29144 1249 aaPredicted RBP17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 MLH1P40692 756 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 EIF2B2P49770 351 aaKnown RBP17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 IYDQ6PHW0 289 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 SCFD2Q8WU76 684 aa17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.77■□□□□ 0.44
COL4A3BP-203ENST00000380494 BCL10O95999 233 aa17.77■□□□□ 0.43
COL4A3BP-203ENST00000380494 SSTR3P32745 418 aaPredicted RBP17.77■□□□□ 0.43
COL4A3BP-203ENST00000380494 SYCP2LQ5T4T6 812 aa17.77■□□□□ 0.43
COL4A3BP-203ENST00000380494 TTC23LQ6PF05 361 aa17.77■□□□□ 0.43
COL4A3BP-203ENST00000380494 RFWD2Q8NHY2 731 aa17.77■□□□□ 0.43
COL4A3BP-203ENST00000380494 C19orf60Q96EN9 201 aa17.77■□□□□ 0.43
COL4A3BP-203ENST00000380494 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.43
COL4A3BP-203ENST00000380494 TBKBP1A7MCY6 615 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 EEF2KO00418 725 aaKnown RBP17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 SERPINB5P36952 375 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 FAM83EQ2M2I3 478 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 ATPAF2Q8N5M1 289 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 GCNAQ96QF7 691 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 ZNF184Q99676 751 aaPredicted RBP17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 SUPT3HB4E1H0 165 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 ATMINO43313 823 aaPredicted RBP17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 HLFQ16534 295 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 RMND5BQ96G75 393 aaPredicted RBP17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 DUSP10Q9Y6W6 482 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 ZNF23P17027 643 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 TBL3Q12788 808 aaKnown RBP17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 DCTN2Q13561 401 aaKnown RBP17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 NAPEPLDQ6IQ20 393 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 B3GNT6Q6ZMB0 384 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 TMEM79Q9BSE2 394 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 LMCD1Q9NZU5 365 aa17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 PDCD6IPQ8WUM4 868 aaKnown RBP17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 CFAP65Q6ZU64 1925 aaKnown RBP17.76■□□□□ 0.43
COL4A3BP-203ENST00000380494 RNF103O00237 685 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 ZBTB39O15060 712 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 OCM2P0CE71 109 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 OCMP0CE72 109 aaPredicted RBP17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 ACADSBP45954 432 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 PURAQ00577 322 aaKnown RBP17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 AARS2Q5JTZ9 985 aaKnown RBP17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 SEL1L3Q68CR1 1132 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 TAF2Q6P1X5 1199 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 SLC26A11Q86WA9 606 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 SHCBP1Q8NEM2 672 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 EVPLLA8MZ36 301 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 PIK3CDO00329 1044 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 TOMM70O94826 608 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 GZMAP12544 262 aa17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 RECQLP46063 649 aaPredicted RBP17.75■□□□□ 0.43
COL4A3BP-203ENST00000380494 CCNG2Q16589 344 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms