RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 RARAP10276 462 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 RALAP11233 206 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 GZMAP12544 262 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 TBX4P57082 545 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 SLMAPQ14BN4 828 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 TXNRD3NBQ6F5E7 133 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 TTC27Q6P3X3 843 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 MTHFD1LQ6UB35 978 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ZPBP2Q6X784 338 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ERICH1Q86X53 443 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ABRAQ8N0Z2 381 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 FBXO25Q8TCJ0 367 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 C18orf25Q96B23 403 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-201ENST00000379433 PLEKHG4BQ96PX9 1271 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ADPGKQ9BRR6 497 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 NIF3L1Q9GZT8 377 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 TMEM134Q9H6X4 195 aa11.42□□□□□ -0.58
NEDD9-201ENST00000379433 ATP8B1O43520 1251 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 ASS1P00966 412 aaKnown RBP11.41□□□□□ -0.58
NEDD9-201ENST00000379433 TUBBP07437 444 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 CYP2C9P11712 490 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 NSUN2Q08J23 767 aaKnown RBP eCLIP11.41□□□□□ -0.58
NEDD9-201ENST00000379433 DGKDQ16760 1214 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 DENND1BQ6P3S1 775 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 DNAJC24Q6P3W2 148 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 C15orf39Q6ZRI6 1047 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 LMNTD2Q8IXW0 634 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 PRELID2Q8N945 189 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 C2orf40Q9H1Z8 148 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 LRRC4CQ9HCJ2 640 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 FAM53CQ9NYF3 392 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 SYNJ2BP-COX16A0A087WUM0 186 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 BTNL10A8MVZ5 291 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 TNPO2O14787 897 aaKnown RBP11.41□□□□□ -0.58
NEDD9-201ENST00000379433 TREHO43280 583 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 MMP3P08254 477 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 SGSM1Q2NKQ1 1148 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 OLFML2BQ68BL8 750 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 TLK2Q86UE8 772 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 JAMLQ86YT9 394 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 WDR49Q8IV35 697 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 SUGP1Q8IWZ8 645 aaKnown RBP11.41□□□□□ -0.58
NEDD9-201ENST00000379433 BHMTQ93088 406 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 NXF3Q9H4D5 531 aaKnown RBP11.41□□□□□ -0.58
NEDD9-201ENST00000379433 COX16Q9P0S2 106 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 R3HDM2Q9Y2K5 976 aaKnown RBP11.41□□□□□ -0.58
NEDD9-201ENST00000379433 IKBKGQ9Y6K9 419 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 OTOFQ9HC10 1997 aa11.41□□□□□ -0.58
NEDD9-201ENST00000379433 LRRD1A4D1F6 860 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 M0QYV0 167 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 UNGP13051 313 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-201ENST00000379433 YARSP54577 528 aaKnown RBP11.4□□□□□ -0.58
NEDD9-201ENST00000379433 BPIFB4P59827 614 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 NOMO3P69849 1222 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 MAMLD1Q13495 774 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 SCYL2Q6P3W7 929 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 HPDLQ96IR7 371 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 CARD9Q9H257 536 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 LGR5O75473 907 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 RABGGTBP53611 331 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 ATP11AP98196 1134 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 MCL1Q07820 350 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 NNTQ13423 1086 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 SLC10A6Q3KNW5 377 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 RUFY4Q6ZNE9 571 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 PPTC7Q8NI37 304 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 FAM76AQ8TAV0 307 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 FAM71BQ8TC56 605 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 USP33Q8TEY7 942 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 CENPTQ96BT3 561 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 ACAP3Q96P50 834 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-201ENST00000379433 ARHGAP39Q9C0H5 1083 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 MIS12Q9H081 205 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 ABHD16BQ9H3Z7 469 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 PDZD7Q9H5P4 517 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 LMCD1Q9NZU5 365 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 MTUS1Q9ULD2 1270 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 STYXL1Q9Y6J8 313 aa11.4□□□□□ -0.58
NEDD9-201ENST00000379433 LINC00854A0A1B0GVQ3 168 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 GOLGA6L10A6NI86 522 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 CD53P19397 219 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 TBXAS1P24557 533 aaPredicted RBP11.4□□□□□ -0.59
NEDD9-201ENST00000379433 CTNNA2P26232 953 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 ANXA13P27216 316 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 TMEM132DQ14C87 1099 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 CCDC142Q17RM4 750 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 ACBD5Q5T8D3 534 aaPredicted RBP11.4□□□□□ -0.59
NEDD9-201ENST00000379433 EMBQ6PCB8 327 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 FOXR1Q6PIV2 292 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 MAMDC4Q6UXC1 1216 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 HOOK3Q86VS8 718 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 SLC13A5Q86YT5 568 aaPredicted RBP11.4□□□□□ -0.59
NEDD9-201ENST00000379433 FMO2Q99518 471 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 SDCBP2Q9H190 292 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 FZD8Q9H461 694 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 GDF3Q9NR23 364 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 SIX4Q9UIU6 781 aa11.4□□□□□ -0.59
NEDD9-201ENST00000379433 FOXO6A8MYZ6 492 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 ACSL3O95573 720 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms