RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SMG8Q8ND04 991 aaKnown RBP20.55■□□□□ 0.88
SSU72-204ENST00000378726 HEXIM2Q96MH2 286 aaKnown RBP20.55■□□□□ 0.88
SSU72-204ENST00000378726 LHX5Q9H2C1 402 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 ST3GAL5Q9UNP4 418 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 CHRNA1P02708 482 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 CTSHP09668 335 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 ITGA4P13612 1032 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 CTNNA2P26232 953 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 NDST1P52848 882 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 AADACL2Q6P093 401 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 SNX9Q9Y5X1 595 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 CCDC188H7C350 402 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 HMGCRP04035 888 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 NR1D1P20393 614 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 LSP1P33241 339 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 HSPA9P38646 679 aaKnown RBP20.54■□□□□ 0.88
SSU72-204ENST00000378726 SLC1A1P43005 524 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 INCA1Q0VD86 236 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 XKR4Q5GH76 650 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 C9orf57Q5W0N0 161 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 TTC39CQ8N584 583 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 PCSK9Q8NBP7 692 aaKnown RBP20.54■□□□□ 0.88
SSU72-204ENST00000378726 FEZF2Q8TBJ5 459 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 NAP1L3Q99457 506 aaPredicted RBP20.54■□□□□ 0.88
SSU72-204ENST00000378726 PLAAQ9Y263 795 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 TRIP11Q15643 1979 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 PROSCO94903 275 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 GJB6O95452 261 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 PYGMP11217 842 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 ECHS1P30084 290 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 APLP1P51693 650 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 KCTD19Q17RG1 926 aaPredicted RBP20.54■□□□□ 0.88
SSU72-204ENST00000378726 SESTD1Q86VW0 696 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 LRRC52Q8N7C0 313 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 RAET1EQ8TD07 263 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 ATP6V1G3Q96LB4 118 aa20.54■□□□□ 0.88
SSU72-204ENST00000378726 FAM124BQ9H5Z6 455 aaPredicted RBP20.54■□□□□ 0.88
SSU72-204ENST00000378726 SART1O43290 800 aaKnown RBP20.53■□□□□ 0.88
SSU72-204ENST00000378726 CD4P01730 458 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 VDRP11473 427 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 KCNE1P15382 129 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 CST5P28325 142 aaPredicted RBP20.53■□□□□ 0.88
SSU72-204ENST00000378726 RWDD2BP57060 319 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 PTGISQ16647 500 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 MAP3K21Q5TCX8 1036 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 EMC10Q5UCC4 262 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 MAATS1Q7Z4T9 603 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 ADAT2Q7Z6V5 191 aaKnown RBP20.53■□□□□ 0.88
SSU72-204ENST00000378726 ARRDC4Q8NCT1 418 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 NT5C1AQ9BXI3 368 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 SENP6Q9GZR1 1112 aaPredicted RBP20.53■□□□□ 0.88
SSU72-204ENST00000378726 DDX47Q9H0S4 455 aaKnown RBP20.53■□□□□ 0.88
SSU72-204ENST00000378726 NR2E1Q9Y466 385 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 CLUL1Q15846 466 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 CNGA2Q16280 664 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 CEP85LQ5SZL2 805 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 DPH6Q7L8W6 267 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 RPAINQ86UA6 219 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 DDX42Q86XP3 938 aaKnown RBP eCLIP20.53■□□□□ 0.88
SSU72-204ENST00000378726 TSPAN18Q96SJ8 248 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 EPN3Q9H201 632 aa20.53■□□□□ 0.88
SSU72-204ENST00000378726 DDX20Q9UHI6 824 aaKnown RBP20.53■□□□□ 0.88
SSU72-204ENST00000378726 PIRO00625 290 aa20.52■□□□□ 0.88
SSU72-204ENST00000378726 XPOTO43592 962 aaKnown RBP20.52■□□□□ 0.88
SSU72-204ENST00000378726 ATF7P17544 494 aaPredicted RBP20.52■□□□□ 0.88
SSU72-204ENST00000378726 THPOP40225 353 aa20.52■□□□□ 0.88
SSU72-204ENST00000378726 RPL7AP62424 266 aaKnown RBP20.52■□□□□ 0.88
SSU72-204ENST00000378726 HLTFQ14527 1009 aaKnown RBP eCLIP20.52■□□□□ 0.88
SSU72-204ENST00000378726 SGO2Q562F6 1265 aa20.52■□□□□ 0.88
SSU72-204ENST00000378726 RNF180Q86T96 592 aa20.52■□□□□ 0.88
SSU72-204ENST00000378726 MRPL45Q9BRJ2 306 aaKnown RBP20.52■□□□□ 0.88
SSU72-204ENST00000378726 CYTH4Q9UIA0 394 aa20.52■□□□□ 0.88
SSU72-204ENST00000378726 KIAA1257Q9ULG3 409 aa20.52■□□□□ 0.88
SSU72-204ENST00000378726 TMEM191CA6NGB0 347 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 MICAL2O94851 1124 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 CYP4A22Q5TCH4 519 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 SEL1L2Q5TEA6 688 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 B4GALNT4Q76KP1 1039 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 TMBIM4Q9HC24 238 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 TCRBV5S1A1TA0A578 114 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 RPLP2P05387 115 aaKnown RBP20.51■□□□□ 0.87
SSU72-204ENST00000378726 MAP2K2P36507 400 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 HSD17B3P37058 310 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 MGAT3Q09327 533 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 FBXW10Q5XX13 1052 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 DNAJC24Q6P3W2 148 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.51■□□□□ 0.87
SSU72-204ENST00000378726 CHST12Q9NRB3 414 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.51■□□□□ 0.87
SSU72-204ENST00000378726 CASP8AP2Q9UKL3 1982 aa20.51■□□□□ 0.87
SSU72-204ENST00000378726 O00370 1275 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 MDH1P40925 334 aaKnown RBP20.5■□□□□ 0.87
SSU72-204ENST00000378726 SEC24CP53992 1094 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 ITGA7Q13683 1181 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 UAP1Q16222 522 aaPredicted RBP20.5■□□□□ 0.87
SSU72-204ENST00000378726 PTPN20Q4JDL3 420 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 FBXO47Q5MNV8 452 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 DAB2IPQ5VWQ8 1189 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 DCUN1D2Q6PH85 259 aa20.5■□□□□ 0.87
SSU72-204ENST00000378726 OR2W6PQ8NHA6 318 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms