RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 GNG14A0A1W2PPG7 69 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 TCF7P36402 384 aaPredicted RBP16.98■□□□□ 0.31
RGP1-201ENST00000378078 EFEMP1Q12805 493 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 C16orf59Q7L2K0 433 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 SNRNP35Q16560 246 aaKnown RBP16.98■□□□□ 0.31
RGP1-201ENST00000378078 SLC44A4Q53GD3 710 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 RCOR2Q8IZ40 523 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 HPDLQ96IR7 371 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 RNF14Q9UBS8 474 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 NARFQ9UHQ1 456 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 HDDC2Q7Z4H3 204 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 CYFIP2Q96F07 1278 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 APOL2Q9BQE5 337 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 DPP3Q9NY33 737 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 SOX13Q9UN79 622 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 DLGAP3O95886 979 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 ZNF200P98182 395 aaPredicted RBP16.98■□□□□ 0.31
RGP1-201ENST00000378078 CCDC103Q8IW40 242 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 ARHGEF26Q96DR7 871 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 TMEM169Q96HH4 297 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 TIMM13Q9Y5L4 95 aaPredicted RBP16.98■□□□□ 0.31
RGP1-201ENST00000378078 METP08581 1390 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 POMCP01189 267 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 TAL1P17542 331 aaPredicted RBP16.98■□□□□ 0.31
RGP1-201ENST00000378078 SERPINB10P48595 397 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 CENPLQ8N0S6 344 aaPredicted RBP16.98■□□□□ 0.31
RGP1-201ENST00000378078 KIF2BQ8N4N8 673 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 CERKQ8TCT0 537 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 NEU2Q9Y3R4 380 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 VWA5AO00534 786 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 HSPA9P38646 679 aaKnown RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 NR1H3Q13133 447 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 GSTA3Q16772 222 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 SLITRK1Q96PX8 696 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 MIR1-1HGQ9H1L0 117 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 TAF1DQ9H5J8 278 aaPredicted RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 TRIM71Q2Q1W2 868 aaKnown RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 TRIM65Q6PJ69 517 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 SRBD1Q8N5C6 995 aaKnown RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 POMGNT2Q8NAT1 580 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 CNDP1Q96KN2 507 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.97■□□□□ 0.31
RGP1-201ENST00000378078 MIF4GDA9UHW6 222 aaKnown RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 DYRK3O43781 588 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 PNMA6AP0CW24 399 aaPredicted RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 CHN1P15882 459 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 TFE3P19532 575 aaPredicted RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 KLRC2P26717 231 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 ICE2Q659A1 982 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 BBS7Q8IWZ6 715 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 PARP9Q8IXQ6 854 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 TFR2Q9UP52 801 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 PSMD12O00232 456 aaPredicted RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 ZNF682O95780 498 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 FAM200BP0CF97 657 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 ODC1P11926 461 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 GOLPH3Q9H4A6 298 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 PIH1D1Q9NWS0 290 aaKnown RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 CCDC188H7C350 402 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 GPR1P46091 355 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 NCKAP1LP55160 1127 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 HNRNPH2P55795 449 aaKnown RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 DCP1BQ8IZD4 617 aaKnown RBP16.97■□□□□ 0.31
RGP1-201ENST00000378078 AAASQ9NRG9 546 aa16.97■□□□□ 0.31
RGP1-201ENST00000378078 NFIXQ14938 502 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 RNF44Q7L0R7 432 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 SH2D3CQ8N5H7 860 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 NT5C1AQ9BXI3 368 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 MYOZ2Q9NPC6 264 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 INTS13Q9NVM9 706 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 F5H5T6 163 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 CCDC22O60826 627 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 FAM107AO95990 144 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 MTHFD1LQ6UB35 978 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
RGP1-201ENST00000378078 CBX4O00257 560 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 STIP1P31948 543 aaKnown RBP16.96■□□□□ 0.31
RGP1-201ENST00000378078 CCR4P51679 360 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 CD4P01730 458 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 FBXO16Q8IX29 292 aaPredicted RBP16.96■□□□□ 0.31
RGP1-201ENST00000378078 SYTL1Q8IYJ3 562 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 GPATCH2LQ9NWQ4 482 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 IMPAD1Q9NX62 359 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 IL1RAPL1Q9NZN1 696 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 GPD1P21695 349 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 DET1Q7L5Y6 550 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 TFB1MQ8WVM0 346 aaKnown RBP16.96■□□□□ 0.31
RGP1-201ENST00000378078 TPD52L3Q96J77 140 aa16.96■□□□□ 0.31
RGP1-201ENST00000378078 TTC26A0AVF1 554 aa16.96■□□□□ 0.3
RGP1-201ENST00000378078 EVPLLA8MZ36 301 aa16.96■□□□□ 0.3
RGP1-201ENST00000378078 EPHB2P29323 1055 aa16.96■□□□□ 0.3
RGP1-201ENST00000378078 TAP1Q03518 808 aa16.96■□□□□ 0.3
RGP1-201ENST00000378078 TMEM132BQ14DG7 1078 aa16.96■□□□□ 0.3
RGP1-201ENST00000378078 LRRC8BQ6P9F7 803 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms