RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 USP15Q9Y4E8 981 aaPredicted RBP14.13□□□□□ -0.15
CKAP2-202ENST00000378034 INSL5Q9Y5Q6 135 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 EYSQ5T1H1 3165 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 RFPL2O75678 378 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 WEE2P0C1S8 567 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 PTPN1P18031 435 aaKnown RBP14.13□□□□□ -0.15
CKAP2-202ENST00000378034 RAP1GAPP47736 663 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 DUSP4Q13115 394 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 CUL2Q13617 745 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 CFAP221Q4G0U5 840 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 HSP90AA4PQ58FG1 418 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 MIIPQ5JXC2 388 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 SMYD5Q6GMV2 418 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 GBP6Q6ZN66 633 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 CRYBG2Q8N1P7 616 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 ATAD1Q8NBU5 361 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 TATDN2Q93075 761 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 ELMO3Q96BJ8 720 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 ZNF707Q96C28 371 aaPredicted RBP14.13□□□□□ -0.15
CKAP2-202ENST00000378034 FAM81BQ96LP2 452 aa14.13□□□□□ -0.15
CKAP2-202ENST00000378034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.15
CKAP2-202ENST00000378034 MYBPHLA2RUH7 354 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 CILPO75339 1184 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 ZNF18P17022 549 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 ALDH1A3P47895 512 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 NDST1P52848 882 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 CBX2Q14781 532 aaPredicted RBP14.12□□□□□ -0.15
CKAP2-202ENST00000378034 SPATA2LQ8IUW3 424 aaPredicted RBP14.12□□□□□ -0.15
CKAP2-202ENST00000378034 DHX40Q8IX18 779 aaKnown RBP14.12□□□□□ -0.15
CKAP2-202ENST00000378034 ELMOD1Q8N336 334 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 B3GALNT2Q8NCR0 500 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 SMG7Q92540 1137 aaKnown RBP14.12□□□□□ -0.15
CKAP2-202ENST00000378034 APOL5Q9BWW9 433 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 INTS2Q9H0H0 1204 aaKnown RBP14.12□□□□□ -0.15
CKAP2-202ENST00000378034 PIDD1Q9HB75 910 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 CRTAC1Q9NQ79 661 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 TMLHEQ9NVH6 421 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 GCNT4Q9P109 453 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 LIMA1Q9UHB6 759 aaKnown RBP14.12□□□□□ -0.15
CKAP2-202ENST00000378034 NME7Q9Y5B8 376 aa14.12□□□□□ -0.15
CKAP2-202ENST00000378034 LRRC10BA6NIK2 292 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 BECN2A8MW95 431 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 HCRTO43612 131 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 ATP2C2O75185 946 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 HAPLN1P10915 354 aaPredicted RBP14.11□□□□□ -0.15
CKAP2-202ENST00000378034 BMP1P13497 986 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 CDK11BP21127 795 aaKnown RBP14.11□□□□□ -0.15
CKAP2-202ENST00000378034 MAGEA11P43364 429 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 KCNQ1P51787 676 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 PSMC1P62191 440 aaKnown RBP14.11□□□□□ -0.15
CKAP2-202ENST00000378034 GCNT1Q02742 428 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 KRT31Q15323 416 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 EXOC3L4Q17RC7 722 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 TJAP1Q5JTD0 557 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 JAKMIP2Q96AA8 810 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 NT5C1AQ9BXI3 368 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 CISHQ9NSE2 258 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 ABI2Q9NYB9 513 aaPredicted RBP14.11□□□□□ -0.15
CKAP2-202ENST00000378034 PRKAG3Q9UGI9 489 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 YIPF1Q9Y548 306 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 ASB3Q9Y575 518 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 EPHB3P54753 998 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 TWF1Q12792 350 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 LRMPQ12912 555 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 IQCB1Q15051 598 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 VSTM1Q6UX27 236 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 ENOSF1Q7L5Y1 443 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 CEP295NLQ96MC4 621 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 HSD3B7Q9H2F3 369 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 CRISPLD1Q9H336 500 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 DPEP3Q9H4B8 488 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 SLC27A5Q9Y2P5 690 aa14.11□□□□□ -0.15
CKAP2-202ENST00000378034 C2orf16Q68DN1 1984 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 ATP8B3O60423 1300 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 CCL16O15467 120 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 PTPN2P17706 415 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 CD58P19256 250 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 RPL10AP62906 217 aaKnown RBP14.1□□□□□ -0.15
CKAP2-202ENST00000378034 MGAT5BQ3V5L5 792 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 MDH1BQ5I0G3 518 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 TRIM65Q6PJ69 517 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 PPM1KQ8N3J5 372 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 LEMD2Q8NC56 503 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 MYLPFQ96A32 169 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 PCED1BQ96HM7 432 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 ZNF512Q96ME7 567 aaPredicted RBP14.1□□□□□ -0.15
CKAP2-202ENST00000378034 WDR6Q9NNW5 1121 aaKnown RBP14.1□□□□□ -0.15
CKAP2-202ENST00000378034 AVENQ9NQS1 362 aaPredicted RBP14.1□□□□□ -0.15
CKAP2-202ENST00000378034 TAB2Q9NYJ8 693 aa14.1□□□□□ -0.15
CKAP2-202ENST00000378034 PRUNE2Q8WUY3 3088 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 PES1O00541 588 aaKnown RBP14.09□□□□□ -0.15
CKAP2-202ENST00000378034 IL9P15248 144 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 TPM4P67936 248 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 CYP27A1Q02318 531 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 IQCEQ6IPM2 695 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 ACOT1Q86TX2 421 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 ITIH5Q86UX2 942 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 UBR7Q8N806 425 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 WHAMMQ8TF30 809 aa14.09□□□□□ -0.15
CKAP2-202ENST00000378034 SEPT5Q99719 369 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms