RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 SEPT4O43236 478 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 HSF2BPO75031 334 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 ERBB2P04626 1255 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 MRPS6P82932 125 aaKnown RBP17.77■□□□□ 0.43
HLA-A-202ENST00000376806 C9orf57Q5W0N0 161 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 ALS2CLQ60I27 953 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 CXCL17Q6UXB2 119 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 CCDC50Q8IVM0 306 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 EXD1Q8NHP7 514 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 CD99L2Q8TCZ2 262 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 ZNF296Q8WUU4 475 aaPredicted RBP17.77■□□□□ 0.43
HLA-A-202ENST00000376806 TRIM31Q9BZY9 425 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 LRRC19Q9H756 370 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 SPC25Q9HBM1 224 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 WDR35Q9P2L0 1181 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 FAN1Q9Y2M0 1017 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 SNX9Q9Y5X1 595 aa17.77■□□□□ 0.43
HLA-A-202ENST00000376806 RARBP10826 455 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 KCNE1P15382 129 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 CYP3A5P20815 502 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 PSMC1P62191 440 aaKnown RBP17.76■□□□□ 0.43
HLA-A-202ENST00000376806 NKX3-2P78367 333 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 TRIM32Q13049 653 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 PDCLQ13371 301 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 PIGHQ14442 188 aaPredicted RBP17.76■□□□□ 0.43
HLA-A-202ENST00000376806 LLGL1Q15334 1064 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 TERF2Q15554 542 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 NBPF20Q3BBV1 942 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 XKR4Q5GH76 650 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 XYLT1Q86Y38 959 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 MRPL45Q9BRJ2 306 aaKnown RBP17.76■□□□□ 0.43
HLA-A-202ENST00000376806 SYNCQ9H7C4 482 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 KLK14Q9P0G3 267 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 VPS18Q9P253 973 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 PARP2Q9UGN5 583 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 KIAA1257Q9ULG3 409 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 IPPQ9Y573 584 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 TRPV2Q9Y5S1 764 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 CDY2AQ9Y6F7 541 aa17.76■□□□□ 0.43
HLA-A-202ENST00000376806 SMIM28A0A1B0GU29 152 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 SIGLEC16A6NMB1 481 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 M0QZ92 97 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 XPOTO43592 962 aaKnown RBP17.75■□□□□ 0.43
HLA-A-202ENST00000376806 RNF40O75150 1001 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 TCF4P15884 667 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 ATF7P17544 494 aaPredicted RBP17.75■□□□□ 0.43
HLA-A-202ENST00000376806 GPD2P43304 727 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 LRRC38Q5VT99 294 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 GDF6Q6KF10 455 aaPredicted RBP17.75■□□□□ 0.43
HLA-A-202ENST00000376806 LCLAT1Q6UWP7 414 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 DPH6Q7L8W6 267 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 CCDC105Q8IYK2 499 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 SMG8Q8ND04 991 aaKnown RBP17.75■□□□□ 0.43
HLA-A-202ENST00000376806 RIN2Q8WYP3 895 aaPredicted RBP17.75■□□□□ 0.43
HLA-A-202ENST00000376806 ZIM3Q96PE6 472 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 TSPAN18Q96SJ8 248 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 BEGAINQ9BUH8 593 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 RNF19AQ9NV58 838 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 F8VP50 259 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 PODXLO00592 558 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 ADAMTS4O75173 837 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 CD4P01730 458 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 RALAP11233 206 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 KRT3P12035 628 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 GABRB2P47870 512 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 ZNF268Q14587 947 aaPredicted RBP17.75■□□□□ 0.43
HLA-A-202ENST00000376806 STILQ15468 1287 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 CFAP58Q5T655 872 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 JOSD2Q8TAC2 188 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 ZNF560Q96MR9 790 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 RUFY1Q96T51 708 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 METTL5Q9NRN9 209 aaKnown RBP17.75■□□□□ 0.43
HLA-A-202ENST00000376806 TSPAN16Q9UKR8 245 aa17.75■□□□□ 0.43
HLA-A-202ENST00000376806 PIRO00625 290 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 KRT1P04264 644 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 DRG2P55039 364 aaKnown RBP17.74■□□□□ 0.43
HLA-A-202ENST00000376806 CACNB2Q08289 660 aaPredicted RBP17.74■□□□□ 0.43
HLA-A-202ENST00000376806 KLF1Q13351 362 aaPredicted RBP17.74■□□□□ 0.43
HLA-A-202ENST00000376806 GOLGA7BQ2TAP0 167 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 TWF2Q6IBS0 349 aaKnown RBP17.74■□□□□ 0.43
HLA-A-202ENST00000376806 UBA3Q8TBC4 463 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 IPO4Q8TEX9 1081 aaKnown RBP17.74■□□□□ 0.43
HLA-A-202ENST00000376806 FNIP1Q8TF40 1166 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 C1orf54Q8WWF1 131 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 SLCO2A1Q92959 643 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 LRRC45Q96CN5 670 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 RBM41Q96IZ5 413 aaKnown RBP17.74■□□□□ 0.43
HLA-A-202ENST00000376806 SH3GL2Q99962 352 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 OSBPL8Q9BZF1 889 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 KLHL11Q9NVR0 708 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 NME7Q9Y5B8 376 aa17.74■□□□□ 0.43
HLA-A-202ENST00000376806 ECEL1O95672 775 aa17.73■□□□□ 0.43
HLA-A-202ENST00000376806 PSMA2P25787 234 aa17.73■□□□□ 0.43
HLA-A-202ENST00000376806 RFC1P35251 1148 aaPredicted RBP17.73■□□□□ 0.43
HLA-A-202ENST00000376806 KCNJ1P48048 391 aa17.73■□□□□ 0.43
HLA-A-202ENST00000376806 FAM47CQ5HY64 1035 aa17.73■□□□□ 0.43
HLA-A-202ENST00000376806 FBXO47Q5MNV8 452 aa17.73■□□□□ 0.43
HLA-A-202ENST00000376806 RSPH3Q86UC2 560 aa17.73■□□□□ 0.43
HLA-A-202ENST00000376806 PIK3R5Q8WYR1 880 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms