RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 RAB6BQ9NRW1 208 aa11.47□□□□□ -0.57
MDC1-201ENST00000376406 WHRNQ9P202 907 aa11.47□□□□□ -0.57
MDC1-201ENST00000376406 VPS9D1Q9Y2B5 631 aa11.47□□□□□ -0.57
MDC1-201ENST00000376406 PDHXO00330 501 aa11.47□□□□□ -0.57
MDC1-201ENST00000376406 PGM1P36871 562 aa11.47□□□□□ -0.57
MDC1-201ENST00000376406 RIN2Q8WYP3 895 aaPredicted RBP11.47□□□□□ -0.57
MDC1-201ENST00000376406 SH2D3AQ9BRG2 576 aa11.47□□□□□ -0.57
MDC1-201ENST00000376406 OLA1Q9NTK5 396 aaKnown RBP11.47□□□□□ -0.57
MDC1-201ENST00000376406 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.576e-9■■□□□ 11.8
MDC1-201ENST00000376406 CTSHP09668 335 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 IRAK1P51617 712 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 HABP4Q5JVS0 413 aaKnown RBP11.46□□□□□ -0.57
MDC1-201ENST00000376406 GPAT2Q6NUI2 795 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 C15orf52Q6ZUT6 534 aaKnown RBP11.46□□□□□ -0.57
MDC1-201ENST00000376406 ARL8AQ96BM9 186 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 RIOX1Q9H6W3 641 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 TMEM120BA0PK00 339 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 AP5Z1O43299 807 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 MYO1DO94832 1006 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 UPP2O95045 317 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 AMHP03971 560 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 EEF1DP29692 281 aaKnown RBP11.46□□□□□ -0.57
MDC1-201ENST00000376406 LHX1P48742 406 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 GEMIN4P57678 1058 aaKnown RBP11.46□□□□□ -0.57
MDC1-201ENST00000376406 MAPK7Q13164 816 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 METTL7BQ6UX53 244 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 NT5DC4Q86YG4 428 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 STK39Q9UEW8 545 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 GTF3C4Q9UKN8 822 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 GOLGA8RI6L899 631 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 RNASEH1O60930 286 aaKnown RBP11.46□□□□□ -0.57
MDC1-201ENST00000376406 NFE2Q16621 373 aaPredicted RBP11.46□□□□□ -0.57
MDC1-201ENST00000376406 LONP2Q86WA8 852 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 SPATA18Q8TC71 538 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 SPON2Q9BUD6 331 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 KDM4CQ9H3R0 1056 aa11.46□□□□□ -0.57
MDC1-201ENST00000376406 STN1Q9H668 368 aaKnown RBP11.46□□□□□ -0.57
MDC1-201ENST00000376406 WASHC5Q12768 1159 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 C3orf62Q6ZUJ4 267 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 SLC13A5Q86YT5 568 aaPredicted RBP11.46□□□□□ -0.58
MDC1-201ENST00000376406 CXorf38Q8TB03 319 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 FUT8Q9BYC5 575 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 MYH2Q9UKX2 1941 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 EEF2KO00418 725 aaKnown RBP11.46□□□□□ -0.58
MDC1-201ENST00000376406 SLC11A2P49281 568 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 NLRP11P59045 1033 aaKnown RBP11.46□□□□□ -0.58
MDC1-201ENST00000376406 ARHGEF7Q14155 803 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 CENPPQ6IPU0 288 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 PGBD3Q8N328 593 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 HPDLQ96IR7 371 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 CUL3Q13618 768 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 GOLGA7BQ2TAP0 167 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 ATP6V0D2Q8N8Y2 350 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 SCFD1Q8WVM8 642 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 MRPS31Q92665 395 aaKnown RBP11.46□□□□□ -0.58
MDC1-201ENST00000376406 TSPAN17Q96FV3 270 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 FRMD8Q9BZ67 464 aaPredicted RBP11.46□□□□□ -0.58
MDC1-201ENST00000376406 THG1LQ9NWX6 298 aaKnown RBP11.46□□□□□ -0.58
MDC1-201ENST00000376406 SNX9Q9Y5X1 595 aa11.46□□□□□ -0.58
MDC1-201ENST00000376406 GTPBP10A4D1E9 387 aaKnown RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 C3orf70A6NLC5 250 aaPredicted RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 ENO1P06733 434 aaKnown RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 ILF2Q12905 390 aaKnown RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 TEX9Q8N6V9 391 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 IDI2Q9BXS1 227 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 METTL5Q9NRN9 209 aaKnown RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 CFAP99D6REC4 459 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 MAP4P27816 1152 aaKnown RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 DSG3P32926 999 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 ST3GAL1Q11201 340 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 ITIH4Q14624 930 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 ZKSCAN4Q969J2 545 aaPredicted RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 PI4K2AQ9BTU6 479 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 PXMP2Q9NR77 195 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 MYH9P35579 1960 aaKnown RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 ATP9BO43861 1147 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 SLC29A2Q14542 456 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 SLC26A7Q8TE54 656 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 SNX19Q92543 992 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 KCND1Q9NSA2 647 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
MDC1-201ENST00000376406 CCT8L1PA6NM43 557 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 CES2O00748 559 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 THP07101 528 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 MAPTP10636 758 aaKnown RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 GNL1P36915 607 aaPredicted RBP11.45□□□□□ -0.58
MDC1-201ENST00000376406 STX3Q13277 289 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 UGP2Q16851 508 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 MGAT5BQ3V5L5 792 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 ATPAF2Q8N5M1 289 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 A0A087X0T9 212 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 DNAJC6O75061 913 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 EFCAB14O75071 495 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 FAM228BP0C875 321 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 ATICP31939 592 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 AARSP49588 968 aaKnown RBP eCLIP11.45□□□□□ -0.58
MDC1-201ENST00000376406 RGS7P49802 495 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 EPHB3P54753 998 aa11.45□□□□□ -0.58
MDC1-201ENST00000376406 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms