RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 MIOSQ9NXC5 875 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 M0QZQ0 153 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 MYO1FO00160 1098 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 KCNK3O14649 394 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 PSTPIP1O43586 416 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 CLSTN1O94985 981 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 PFKMP08237 780 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 CD19P15391 556 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 TUSC3Q13454 348 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 ZNF394Q53GI3 561 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 TMEM110Q86TL2 294 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 PDCL2Q8N4E4 241 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 ZFP42Q96MM3 310 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 C11orf70Q9BRQ4 267 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 DSEQ9UL01 958 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 L1RE1Q9UN81 338 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 NME7Q9Y5B8 376 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 PGRMC1O00264 195 aaKnown RBP11.77□□□□□ -0.53
PDPN-202ENST00000376057 PODXLO00592 558 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 PIGHQ14442 188 aaPredicted RBP11.77□□□□□ -0.53
PDPN-202ENST00000376057 DCLRE1AQ6PJP8 1040 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 SLC39A5Q6ZMH5 540 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 MTERF4Q7Z6M4 381 aaKnown RBP11.77□□□□□ -0.53
PDPN-202ENST00000376057 PASD1Q8IV76 773 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 TMEM130Q8N3G9 435 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 ANKRD52Q8NB46 1076 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.77□□□□□ -0.53
PDPN-202ENST00000376057 SLC35F5Q8WV83 523 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 HNRNPLLQ8WVV9 542 aaKnown RBP11.77□□□□□ -0.53
PDPN-202ENST00000376057 C18orf8Q96DM3 657 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 ZNF333Q96JL9 665 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 DEFB118Q96PH6 123 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 SNX25Q9H3E2 840 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 TMEM161AQ9NX61 479 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 CYTH4Q9UIA0 394 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.53
PDPN-202ENST00000376057 DSC1Q08554 894 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 PDCLQ13371 301 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 GPNMBQ14956 572 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 BRD3Q15059 726 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 ELF2Q15723 593 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 PTPN20Q4JDL3 420 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
PDPN-202ENST00000376057 CTU1Q7Z7A3 348 aaKnown RBP11.76□□□□□ -0.53
PDPN-202ENST00000376057 XYLT1Q86Y38 959 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 ADGRF2Q8IZF7 708 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 DNAJC5GQ8N7S2 189 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 HNRNPABQ99729 332 aaKnown RBP11.76□□□□□ -0.53
PDPN-202ENST00000376057 PLVAPQ9BX97 442 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 ANKZF1Q9H8Y5 726 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 TSPAN16Q9UKR8 245 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 MEIS3P2A8K0S8 358 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 CYB561D2O14569 222 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 ATMINO43313 823 aaPredicted RBP11.76□□□□□ -0.53
PDPN-202ENST00000376057 TNFRSF8P28908 595 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 MESDQ14696 234 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 DCAF12L1Q5VU92 463 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 DNAJC24Q6P3W2 148 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 EIF1ADQ8N9N8 165 aaKnown RBP11.76□□□□□ -0.53
PDPN-202ENST00000376057 LINC01599Q8WXQ3 324 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 RNF208Q9H0X6 261 aa11.76□□□□□ -0.53
PDPN-202ENST00000376057 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDPN-202ENST00000376057 A8MXQ7 604 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 BHMG1C9JSJ3 638 aaPredicted RBP11.75□□□□□ -0.53
PDPN-202ENST00000376057 FGFR1P11362 822 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 TYMPP19971 482 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 RFC2P35250 354 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 ACADSBP45954 432 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 RWDD2BP57060 319 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 MTFR1Q15390 333 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 CCDC70Q6NSX1 233 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 CD300LGQ6UXG3 332 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 KATNAL2Q8IYT4 538 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 SEPT8Q92599 483 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 HSFY1Q96LI6 401 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 NCAPGQ9BPX3 1015 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
PDPN-202ENST00000376057 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
PDPN-202ENST00000376057 M0QYV0 167 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 NBNO60934 754 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 PTPN7P35236 360 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 SCNN1GP51170 649 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 BCAT1P54687 386 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 PLCB3Q01970 1234 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 BST2Q10589 180 aaKnown RBP11.75□□□□□ -0.53
PDPN-202ENST00000376057 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
PDPN-202ENST00000376057 POLNQ7Z5Q5 900 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 NOA1Q8NC60 698 aaKnown RBP11.75□□□□□ -0.53
PDPN-202ENST00000376057 OR6B3Q8NGW1 331 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 KCTD13Q8WZ19 329 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 LPPQ93052 612 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 SENP8Q96LD8 212 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 CPXM1Q96SM3 734 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDPN-202ENST00000376057 CDH9Q9ULB4 789 aa11.75□□□□□ -0.53
PDPN-202ENST00000376057 DPYSL4O14531 572 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms