RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 RFC1P35251 1148 aaPredicted RBP13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 CETN2P41208 172 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 CLNS1AP54105 237 aaKnown RBP13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 ORC1Q13415 861 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 TFDP1Q14186 410 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 PLEKHG4Q58EX7 1191 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 DLK2Q6UY11 383 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 CCHCR1Q8TD31 782 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 MIEF2Q96C03 454 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 TTC25Q96NG3 672 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 SMC6Q96SB8 1091 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 ZNF302Q9NR11 478 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 NKX1-2Q9UD57 310 aaPredicted RBP13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 RABGEF1Q9UJ41 708 aa13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
TNFSF13B-201ENST00000375887 ITGAVP06756 1048 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CD48P09326 243 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CCND1P24385 295 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CDC25CP30307 473 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 SKIV2L2P42285 1042 aaKnown RBP13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CNTN2Q02246 1040 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 MCL1Q07820 350 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 NR1H3Q13133 447 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CAPSQ13938 189 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 SCARA5Q6ZMJ2 495 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 RGS9BPQ6ZS82 235 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 OTOAQ7RTW8 1153 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 VSIG1Q86XK7 387 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 ACTL9Q8TC94 416 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 LRRC37BQ96QE4 947 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 PCYT2Q99447 389 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CYTH4Q9UIA0 394 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 ADAMTS5Q9UNA0 930 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 COL11A1P12107 1806 aaPredicted RBP13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 RLFQ13129 1914 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CBX6O95503 412 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CALB1P05937 261 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 GM2AP17900 193 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CTCFP49711 727 aaPredicted RBP13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 HIRAP54198 1017 aaPredicted RBP13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 MAPK6Q16659 721 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 LVRNQ6Q4G3 990 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 ZNF276Q8N554 614 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 JOSD2Q8TAC2 188 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 C10orf82Q8WW14 230 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 SLC7A3Q8WY07 619 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CPT1BQ92523 772 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 SLC7A6OSQ96CW6 309 aaPredicted RBP13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 ZBTB10Q96DT7 871 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 KLF6Q99612 283 aaPredicted RBP13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 ZWILCHQ9H900 591 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 PCDH9Q9HC56 1237 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 NOP53Q9NZM5 478 aaKnown RBP13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 USH1CQ9Y6N9 552 aa13.05□□□□□ -0.32
TNFSF13B-201ENST00000375887 CCDC189A1A4V9 331 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 WDR91A4D1P6 747 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 GOLGA8RI6L899 631 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 ATG7O95352 703 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 ADRA1DP25100 572 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 SLC18A1P54219 525 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 OSTNP61366 133 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 OTUD4Q01804 1114 aaKnown RBP13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 HIF1AQ16665 826 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 EFHC2Q5JST6 749 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 CENPUQ71F23 418 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 FBF1Q8TES7 1133 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 ZNF75CPQ92670 426 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 KCNN1Q92952 543 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 CYLDQ9NQC7 956 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 SMG5Q9UPR3 1016 aaKnown RBP13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 SHOC2Q9UQ13 582 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 SNCAIPQ9Y6H5 919 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 PTPRAP18433 802 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 PTPN20Q4JDL3 420 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 CIAPIN1Q6FI81 312 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 DENND1BQ6P3S1 775 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 ZNF449Q6P9G9 518 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 BRSK2Q8IWQ3 736 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 TMEM35BQ8NCS4 154 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 ZNF280CQ8ND82 737 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 LRRC8CQ8TDW0 803 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 CDHR1Q96JP9 859 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 LRMDAQ9H2I8 198 aa13.04□□□□□ -0.32
TNFSF13B-201ENST00000375887 PARP14Q460N5 1801 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 EIF4E1BA6NMX2 242 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 ADCY3O60266 1144 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 CST8O60676 142 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 LRCH4O75427 683 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 PTPN7P35236 360 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 RPL22P35268 128 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 PIGHQ14442 188 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 TAF5Q15542 800 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 CEP128Q6ZU80 1094 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 C3orf62Q6ZUJ4 267 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 UNC45BQ8IWX7 931 aa13.03□□□□□ -0.32
TNFSF13B-201ENST00000375887 EMC1Q8N766 993 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms