RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 DDX5P17844 614 aaKnown RBP14.26□□□□□ -0.13
COL4A1-201ENST00000375820 ZNF543Q08ER8 600 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 DNAL1Q4LDG9 190 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 TBC1D16Q8TBP0 767 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 OLFML3Q9NRN5 406 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 RNF112Q9ULX5 631 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 FAM107AO95990 144 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 CYP2C9P11712 490 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 EPHB2P29323 1055 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 RAD9BQ6WBX8 426 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 CARNMT1Q8N4J0 409 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 USP6NLQ92738 828 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 E2F7Q96AV8 911 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 TSC22D4Q9Y3Q8 395 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 EIF3HO15372 352 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL4A1-201ENST00000375820 PRIM2P49643 509 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 CTCFP49711 727 aaPredicted RBP14.26□□□□□ -0.13
COL4A1-201ENST00000375820 KYAT1Q16773 422 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 SV2CQ496J9 727 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 CDC42EP5Q6NZY7 148 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 DNAAF5Q86Y56 855 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 STAMBPL1Q96FJ0 436 aa14.26□□□□□ -0.13
COL4A1-201ENST00000375820 APOA4P06727 396 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 PCNAP12004 261 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 RGS4P49798 205 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 SLC29A2Q14542 456 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 SCN3BQ9NY72 215 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 GGA3Q9NZ52 723 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 NR3C2P08235 984 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 SNX17Q15036 470 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 SDE2Q6IQ49 451 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 PPP1R14AQ96A00 147 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 TARS2Q9BW92 718 aaKnown RBP14.25□□□□□ -0.13
COL4A1-201ENST00000375820 CLASP1Q7Z460 1538 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 PSMD3O43242 534 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 SUPT7LO94864 414 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 KHDRBS2Q5VWX1 349 aaKnown RBP14.25□□□□□ -0.13
COL4A1-201ENST00000375820 EPS8L3Q8TE67 593 aaKnown RBP14.25□□□□□ -0.13
COL4A1-201ENST00000375820 TFB1MQ8WVM0 346 aaKnown RBP14.25□□□□□ -0.13
COL4A1-201ENST00000375820 SEPT1Q8WYJ6 367 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 FAM129AQ9BZQ8 928 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 SNRPAP09012 282 aaKnown RBP14.25□□□□□ -0.13
COL4A1-201ENST00000375820 CYP2C19P33261 490 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 ARID3BQ8IVW6 561 aaPredicted RBP14.25□□□□□ -0.13
COL4A1-201ENST00000375820 ZSWIM2Q8NEG5 633 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 THAP2Q9H0W7 228 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 DLGAP2Q9P1A6 1054 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 COPG1Q9Y678 874 aaKnown RBP14.25□□□□□ -0.13
COL4A1-201ENST00000375820 TRIM49D1C9J1S8 452 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 CDH16O75309 829 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 CCZ1BP86790 482 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 CCZ1P86791 482 aaPredicted RBP14.25□□□□□ -0.13
COL4A1-201ENST00000375820 ADSSL1Q8N142 457 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 DNAJC9Q8WXX5 260 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 KCNK16Q96T55 309 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 CHST12Q9NRB3 414 aa14.25□□□□□ -0.13
COL4A1-201ENST00000375820 MT-CO1P00395 513 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TRIM25Q14258 630 aaKnown RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 KCNB1Q14721 858 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 SYDE1Q6ZW31 735 aaPredicted RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 SRLQ86TD4 932 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 SH3GL3Q99963 347 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 CD248Q9HCU0 757 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 UVRAGQ9P2Y5 699 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 HERC5Q9UII4 1024 aaKnown RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 EVPLLA8MZ36 301 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 RBP3P10745 1247 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 ITGB6P18564 788 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 THPOP40225 353 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 PDK1Q15118 436 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 BBS7Q8IWZ6 715 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TEX13BQ9BXU2 312 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 CCDC134Q9H6E4 229 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 GPRC5CQ9NQ84 441 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 PAK5Q9P286 719 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 MORC2Q9Y6X9 1032 aaPredicted RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 A0A1B0GTH6 734 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TTLL13PA6NNM8 815 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 KLC1Q07866 573 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 CCDC92Q53HC0 331 aaPredicted RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TTC33Q6PID6 262 aaPredicted RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 SP8Q8IXZ3 490 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TUBGCP3Q96CW5 907 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 CMTM5Q96DZ9 223 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 WDCPQ9H6R7 721 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 ALG6Q9Y672 507 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 PSMD14O00487 310 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 USP1O94782 785 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 LRG1P02750 347 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 TGM2P21980 687 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 LSP1P33241 339 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 SERPINB9P50453 376 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 R3HDM1Q15032 1099 aaKnown RBP14.24□□□□□ -0.13
COL4A1-201ENST00000375820 NAB2Q15742 525 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 UGP2Q16851 508 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 GLB1LQ6UWU2 654 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 SCFD2Q8WU76 684 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 GID8Q9NWU2 228 aa14.24□□□□□ -0.13
COL4A1-201ENST00000375820 UBP1Q9NZI7 540 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms