RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 PCDHA8Q9Y5H6 950 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 SLC25A12O75746 678 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 PCDH8O95206 1070 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 FGGP02679 453 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 LPIN1Q14693 890 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 TKFCQ3LXA3 575 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 FAM83BQ5T0W9 1011 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 ZNF618Q5T7W0 954 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 RCOR2Q8IZ40 523 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 ZNF564Q8TBZ8 553 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-203ENST00000375437 KLHL25Q9H0H3 589 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 SPON1Q9HCB6 807 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 HPS4Q9NQG7 708 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 AGO2Q9UKV8 859 aaKnown RBP5.66□□□□□ -1.5
SCN2A-203ENST00000375437 CDY2AQ9Y6F7 541 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 CDY1Q9Y6F8 540 aa5.66□□□□□ -1.5
SCN2A-203ENST00000375437 DISP3Q9P2K9 1392 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 MEI4A8MW99 385 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 CHP2O43745 196 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 POLBP06746 335 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 P4HBP07237 508 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 CETPP11597 493 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 GSPT1P15170 499 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 HALP42357 657 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 NUP107P57740 925 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 PSMC5P62195 406 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 CYLC2Q14093 348 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 RPTNQ6XPR3 784 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 NUDT12Q9BQG2 462 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 EXOSC4Q9NPD3 245 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 INTS7Q9NVH2 962 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 VAV3Q9UKW4 847 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 RUVBL2Q9Y230 463 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 TBX22Q9Y458 520 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 PCDHB6Q9Y5E3 794 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 ZBTB5O15062 677 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 GPR182O15218 404 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 CXCR5P32302 372 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 CRKP46108 304 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 PEX5P50542 639 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 NDUFA8P51970 172 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 ARFIP2P53365 341 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 PPIL2Q13356 520 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 GRAPQ13588 217 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 CES5AQ6NT32 575 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 GRAPLQ8TC17 118 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 BSNDQ8WZ55 320 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 C18orf8Q96DM3 657 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 TGS1Q96RS0 853 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 MOV10L1Q9BXT6 1211 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 HDHD2Q9H0R4 259 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 CEP72Q9P209 647 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 ZNF232Q9UNY5 417 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 USP19O94966 1318 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 KDM6AO15550 1401 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 FAM220BPB1ANY3 271 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 F5H5T6 163 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 EEF2KO00418 725 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 SRP72O76094 671 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 MTA2O94776 668 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 KLHL2O95198 593 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 LYNP07948 512 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 HOXC6P09630 235 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 SUPT20HL2P0C7V6 817 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 CDK8P49336 464 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 BIKQ13323 160 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 NNTQ13423 1086 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 TSNQ15631 228 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 AGAP9Q5VTM2 703 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 ZNF557Q8N988 423 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 RNFT2Q96EX2 444 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 TMA16Q96EY4 203 aaKnown RBP5.65□□□□□ -1.5
SCN2A-203ENST00000375437 NMRK2Q9NPI5 230 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 RNF112Q9ULX5 631 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 HPS5Q9UPZ3 1129 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 TET3O43151 1660 aa5.65□□□□□ -1.5
SCN2A-203ENST00000375437 TRPC5OSA6NMA1 111 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 ANXA9O76027 345 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 HAUS5O94927 633 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 MFN2O95140 757 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 CLUP10909 449 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 HSD3B2P26439 372 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 CBX5P45973 191 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 GCLCP48506 637 aaPredicted RBP5.65□□□□□ -1.51
SCN2A-203ENST00000375437 CTTNQ14247 550 aaKnown RBP5.65□□□□□ -1.51
SCN2A-203ENST00000375437 ANKRD27Q96NW4 1050 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 TRPC4Q9UBN4 977 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 ZFYVE16Q7Z3T8 1539 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 KIAA0232Q92628 1395 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 SLC26A4O43511 780 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 VPS26AO75436 327 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 SNUPNO95149 360 aaKnown RBP5.65□□□□□ -1.51
SCN2A-203ENST00000375437 GH2P01242 217 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 CYP2E1P05181 493 aaPredicted RBP5.65□□□□□ -1.51
SCN2A-203ENST00000375437 PCNAP12004 261 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 CHRM3P20309 590 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 GPSM2P81274 684 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 XRCC4Q13426 336 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 DNAL1Q4LDG9 190 aa5.65□□□□□ -1.51
SCN2A-203ENST00000375437 KLHL12Q53G59 568 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms