RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 HSPA4LO95757 839 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 MAP3K7CLP57077 242 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 CAPSQ13938 189 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 RRP1BQ14684 758 aaKnown RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 AGR3Q8TD06 166 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 TLR10Q9BXR5 811 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 SUDS3Q9H7L9 328 aaPredicted RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 CASP2P42575 452 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 MAPK7Q13164 816 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 SLC27A1Q6PCB7 646 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 C3orf62Q6ZUJ4 267 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 GPR142Q7Z601 462 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 FAM172AQ8WUF8 416 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 TAS2R14Q9NYV8 317 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 PPARGC1AQ9UBK2 798 aaKnown RBP18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 NEMP1O14524 444 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 C10orf120Q5SQS8 335 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 CASKIN2Q8WXE0 1202 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 TSPAN16Q9UKR8 245 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 GLTPD2A6NH11 291 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 MCF2P10911 925 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 TNFSF9P41273 254 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 CLEC16AQ2KHT3 1053 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 WDR59Q6PJI9 974 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 FBXO25Q8TCJ0 367 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 TRIM62Q9BVG3 475 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 ISCUQ9H1K1 167 aa18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 MRPL42Q9Y6G3 142 aaKnown RBP18.8■□□□□ 0.6
PTPDC1-202ENST00000375360 B4GALT5O43286 388 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 TRIM67Q6ZTA4 783 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 MCOLN2Q8IZK6 566 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 TMEM169Q96HH4 297 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 GAD1Q99259 594 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 CYTH2Q99418 400 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 KCTD10Q9H3F6 313 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 E2F8A0AVK6 867 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 C3orf70A6NLC5 250 aaPredicted RBP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 CFLARO15519 480 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 PQBP1O60828 265 aaKnown RBP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 JAG1P78504 1218 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 NSUN2Q08J23 767 aaKnown RBP eCLIP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 MEI1Q5TIA1 1274 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 TBC1D1Q86TI0 1168 aaPredicted RBP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 CRLF3Q8IUI8 442 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 SH3TC2Q8TF17 1288 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 RAB3IPQ96QF0 476 aaPredicted RBP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 GOLGA4Q13439 2230 aaKnown RBP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 PROSCO94903 275 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 ODC1P11926 461 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 MX2P20592 715 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 MAGEA4P43358 317 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 GCNT1Q02742 428 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 KLC3Q6P597 504 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 ZC3H15Q8WU90 426 aaKnown RBP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 MTG1Q9BT17 334 aaPredicted RBP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 RECQL4O94761 1208 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 KPNA2P52292 529 aaKnown RBP18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 MEA1Q16626 185 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 MDH1BQ5I0G3 518 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 EEF1DP3Q658K8 133 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 ATG16L1Q676U5 607 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 SCUBE3Q8IX30 993 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 ARRDC4Q8NCT1 418 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 OR5B17Q8NGF7 314 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 GGT7Q9UJ14 662 aa18.79■□□□□ 0.6
PTPDC1-202ENST00000375360 ZC3H4Q9UPT8 1303 aaKnown RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 STAT4Q14765 748 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 KCTD19Q17RG1 926 aaPredicted RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 SLC35G1Q2M3R5 365 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 IL31Q6EBC2 164 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 CHSY1Q86X52 802 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 ATPAF2Q8N5M1 289 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 HDAC7Q8WUI4 952 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 ZBTB10Q96DT7 871 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 ASIC4Q96FT7 647 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 TGS1Q96RS0 853 aaKnown RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 TRIM55Q9BYV6 548 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 WDCPQ9H6R7 721 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 BTBD7Q9P203 1132 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 SPDYE5A6NIY4 337 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 CDH16O75309 829 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 WDR75Q8IWA0 830 aaKnown RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 PDCD7Q8N8D1 485 aaKnown RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 SLITRK1Q96PX8 696 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 TMEM121Q9BTD3 319 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 TRABDQ9H4I3 376 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 LMCD1Q9NZU5 365 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 PARP4Q9UKK3 1724 aaKnown RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 GLI1P08151 1106 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 ESRRAP11474 423 aaPredicted RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 EIF4BP23588 611 aaKnown RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 PAPOLAP51003 745 aaKnown RBP18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 DMTNQ08495 405 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 SH2D4BQ5SQS7 431 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 ASB7Q9H672 318 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 KIAA1257Q9ULG3 409 aa18.78■□□□□ 0.6
PTPDC1-202ENST00000375360 PLA2G6O60733 806 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 ETFBP38117 255 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms