RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 BCO2Q9BYV7 579 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 TMBIM4Q9HC24 238 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 KLC4Q9NSK0 619 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 ZDHHC18Q9NUE0 388 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 SNX24Q9Y343 169 aa8.68□□□□□ -1.02
UBR4-202ENST00000375224 KAT6AQ92794 2004 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 LACTBL1A8MY62 500 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 GPR25O00155 361 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 GAS8O95995 478 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 KRT14P02533 472 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 SLC8A1P32418 973 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 ASPAP45381 313 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 PLTPP55058 493 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 ACVR2BQ13705 512 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 PIGHQ14442 188 aaPredicted RBP8.67□□□□□ -1.02
UBR4-202ENST00000375224 PCBP1Q15365 356 aaKnown RBP eCLIP8.67□□□□□ -1.024e-20■□□□□ 8.2
UBR4-202ENST00000375224 AMHR2Q16671 573 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 AGBL2Q5U5Z8 902 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 SPRYD7Q5W111 196 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 DCUN1D2Q6PH85 259 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 RCOR2Q8IZ40 523 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 C17orf50Q8WW18 174 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 PDZD7Q9H5P4 517 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 WDR35Q9P2L0 1181 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 TMEM191CA6NGB0 347 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 MMP3P08254 477 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 WEE2P0C1S8 567 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 PYGBP11216 843 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 COPS2P61201 443 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 CAV1Q03135 178 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 LMNB2Q03252 620 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 GRIK4Q16099 956 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 DCAF4L1Q3SXM0 396 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 ODF2Q5BJF6 829 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 TTC27Q6P3X3 843 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 KDM7AQ6ZMT4 941 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 ZNF668Q96K58 619 aaPredicted RBP8.67□□□□□ -1.02
UBR4-202ENST00000375224 ACAP3Q96P50 834 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 YIPF3Q9GZM5 350 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 DDX56Q9NY93 547 aaKnown RBP8.67□□□□□ -1.02
UBR4-202ENST00000375224 WHRNQ9P202 907 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
UBR4-202ENST00000375224 ITGA11Q9UKX5 1188 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 C2CD2Q9Y426 696 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 H0YGN5 161 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 STAU1O95793 577 aaKnown RBP8.67□□□□□ -1.02
UBR4-202ENST00000375224 CFHP08603 1231 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 ZNF286BP0CG31 522 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 IFFO1Q0D2I5 559 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 TMEM132DQ14C87 1099 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 E2F5Q15329 346 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 UAP1Q16222 522 aaPredicted RBP8.67□□□□□ -1.02
UBR4-202ENST00000375224 WDR72Q3MJ13 1102 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 GJC2Q5T442 439 aaPredicted RBP8.67□□□□□ -1.02
UBR4-202ENST00000375224 RNF187Q5TA31 235 aaPredicted RBP8.67□□□□□ -1.02
UBR4-202ENST00000375224 THEMIS2Q5TEJ8 643 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 PHLDB2Q86SQ0 1253 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 HOOK3Q86VS8 718 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 CPNE8Q86YQ8 564 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 BBOF1Q8ND07 529 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 FAM81AQ8TBF8 368 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 DYDC1Q8WWB3 177 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 TXLNGYQ9BZA5 131 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 NFS1Q9Y697 457 aa8.67□□□□□ -1.02
UBR4-202ENST00000375224 IQCF3P0C7M6 154 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 CD19P15391 556 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 ARF4P18085 180 aaPredicted RBP8.66□□□□□ -1.02
UBR4-202ENST00000375224 ITIH2P19823 946 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 PMS2P54278 862 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 RBP5P82980 135 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 CCNG2Q16589 344 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 JADE1Q6IE81 842 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 SCARA5Q6ZMJ2 495 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 CEP128Q6ZU80 1094 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 ZDHHC14Q8IZN3 488 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 C1orf127Q8N9H9 656 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 BCAS4Q8TDM0 211 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 TRIM7Q9C029 511 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 MIS12Q9H081 205 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 PABPC3Q9H361 631 aaKnown RBP8.66□□□□□ -1.02
UBR4-202ENST00000375224 KIAA1257Q9ULG3 409 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 USTQ9Y2C2 406 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 ATP8A1Q9Y2Q0 1164 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 TCRBV7S2A1N4TA0A589 114 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 VTNP04004 478 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 NFICP08651 508 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 SMPD1P17405 629 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 NR1D1P20393 614 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 RPL21P46778 160 aaKnown RBP8.66□□□□□ -1.02
UBR4-202ENST00000375224 ZNF394Q53GI3 561 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 DENND2CQ68D51 928 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 CDR2LQ86X02 465 aaPredicted RBP8.66□□□□□ -1.02
UBR4-202ENST00000375224 NIPA2Q8N8Q9 360 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 ART4Q93070 314 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 OSBPL8Q9BZF1 889 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 DCLK3Q9C098 648 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 PLEKHA5Q9HAU0 1116 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 GRHL1Q9NZI5 618 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 SIX4Q9UIU6 781 aa8.66□□□□□ -1.02
UBR4-202ENST00000375224 DERAQ9Y315 318 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms