RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 ZNF669Q96BR6 464 aaPredicted RBP15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 CRLS1Q9UJA2 301 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 NEK2P51955 445 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 MRPL28Q13084 256 aaKnown RBP15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 TBC1D19Q8N5T2 526 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 KATNAL1Q9BW62 490 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 RNF19AQ9NV58 838 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 SMNDC1O75940 238 aaKnown RBP eCLIP15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 ITGB6P18564 788 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 DGKDQ16760 1214 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 SV2CQ496J9 727 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 STX19Q8N4C7 294 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 ZSWIM2Q8NEG5 633 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 ARMC2Q8NEN0 867 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 ATG4AQ8WYN0 398 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 SNX12Q9UMY4 172 aa15.33■□□□□ 0.04
NOTCH4-201ENST00000375023 PGS1Q32NB8 556 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 OLFML2BQ68BL8 750 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 ERAP2Q6P179 960 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 OTOAQ7RTW8 1153 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 UBP1Q9NZI7 540 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 MCM8Q9UJA3 840 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 PCDHB8Q9UN66 801 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 TAF6LQ9Y6J9 622 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 CDHR2Q9BYE9 1310 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 TBC1D4O60343 1298 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 MTHFD1LQ6UB35 978 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 ACOT1Q86TX2 421 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 ZNF473Q8WTR7 871 aaKnown RBP15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 OSBPL10Q9BXB5 764 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 MOV10L1Q9BXT6 1211 aaKnown RBP15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 CIPCQ9C0C6 399 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 PIH1D1Q9NWS0 290 aaKnown RBP15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 ZDHHC9Q9Y397 364 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 CFAP74Q9C0B2 1584 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 EPHB2P29323 1055 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 SERPINB5P36952 375 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 KCNB1Q14721 858 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 DEFB129Q9H1M3 183 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 KCNF1Q9H3M0 494 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 FAM96AQ9H5X1 160 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 SLC18A3Q16572 532 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 DIS3LQ8TF46 1054 aaKnown RBP15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 STN1Q9H668 368 aaKnown RBP15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 KCNH7Q9NS40 1196 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 FBXO16Q8IX29 292 aaPredicted RBP15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 FLCNQ8NFG4 579 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 IGDCC4Q8TDY8 1250 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 DPP3Q9NY33 737 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 PRR23D1E9PI22 279 aaPredicted RBP15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 PRR23D2P0DMB1 279 aaPredicted RBP15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 MAPRE2Q15555 327 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 ERP27Q96DN0 273 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 MTMR12Q9C0I1 747 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 WDCPQ9H6R7 721 aa15.32■□□□□ 0.04
NOTCH4-201ENST00000375023 A8MX80 341 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 MAP3K7CLP57077 242 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 HPCAP84074 193 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 STAT4Q14765 748 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 CEP41Q9BYV8 373 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 KLC4Q9NSK0 619 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 ZNF286BP0CG31 522 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 SLC1A1P43005 524 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 CLCN3P51790 818 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 AP3M2P53677 418 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 JMJD4Q9H9V9 463 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 WWOXQ9NZC7 414 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 SGPL1O95470 568 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 POU4F1Q01851 419 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 EML3Q32P44 896 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 TIMM13Q9Y5L4 95 aaPredicted RBP15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 CASTOR2A6NHX0 329 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 ASS1P00966 412 aaKnown RBP15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 ACO1P21399 889 aaKnown RBP15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 NDUFV1P49821 464 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 PIGHQ14442 188 aaPredicted RBP15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 CLEC16AQ2KHT3 1053 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 TDRD10Q5VZ19 366 aaKnown RBP15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 DDIT4Q9NX09 232 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 PSMC3IPQ9P2W1 217 aaPredicted RBP15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 SLC37A4O43826 429 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 HNRNPCP07910 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 PCNAP12004 261 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 MXRA8Q9BRK3 442 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 OSBPL8Q9BZF1 889 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 CATSPERBQ9H7T0 1116 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 PCDHB12Q9Y5F1 795 aa15.31■□□□□ 0.04
NOTCH4-201ENST00000375023 LZTS3O60299 673 aaPredicted RBP15.3■□□□□ 0.04
NOTCH4-201ENST00000375023 TSPAN3O60637 253 aa15.3■□□□□ 0.04
NOTCH4-201ENST00000375023 MBL2P11226 248 aaPredicted RBP15.3■□□□□ 0.04
NOTCH4-201ENST00000375023 MAGEA4P43358 317 aa15.3■□□□□ 0.04
NOTCH4-201ENST00000375023 KCNV1Q6PIU1 500 aa15.3■□□□□ 0.04
NOTCH4-201ENST00000375023 RPRD1AQ96P16 312 aaPredicted RBP15.3■□□□□ 0.04
NOTCH4-201ENST00000375023 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
NOTCH4-201ENST00000375023 TBKBP1A7MCY6 615 aa15.3■□□□□ 0.04
NOTCH4-201ENST00000375023 CKBP12277 381 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms