RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 OGDHQ02218 1023 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 PRKCZQ05513 592 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 NOGQ13253 232 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 NBPF20Q3BBV1 942 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 CYP4A22Q5TCH4 519 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 CYP4F22Q6NT55 531 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 RSPH3Q86UC2 560 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 SESTD1Q86VW0 696 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 UNC93AQ86WB7 457 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 DDX42Q86XP3 938 aaKnown RBP eCLIP19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 XYLT1Q86Y38 959 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 HEXIM2Q96MH2 286 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 CPXM1Q96SM3 734 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 IPPQ9Y573 584 aa19.03■□□□□ 0.64
HLA-DQB1-201ENST00000374943 M0QZ92 97 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 AKAP5P24588 427 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 PNPLA4P41247 253 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 PSMC1P62191 440 aaKnown RBP19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 KLF1Q13351 362 aaPredicted RBP19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 PDCLQ13371 301 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 CXCL17Q6UXB2 119 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 REM2Q8IYK8 340 aaPredicted RBP19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 SMG8Q8ND04 991 aaKnown RBP19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 ZNF560Q96MR9 790 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 NEUROG2Q9H2A3 272 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 USTQ9Y2C2 406 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 SNX9Q9Y5X1 595 aa19.02■□□□□ 0.64
HLA-DQB1-201ENST00000374943 PGK1P00558 417 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ERBB2P04626 1255 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GGCXP38435 758 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CACNB2Q08289 660 aaPredicted RBP19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GLRA4Q5JXX5 417 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 DAB2IPQ5VWQ8 1189 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GDF6Q6KF10 455 aaPredicted RBP19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SERINC5Q86VE9 423 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 LRRC45Q96CN5 670 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 MCRS1Q96EZ8 462 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RBM41Q96IZ5 413 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SH3GL2Q99962 352 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 APOL6Q9BWW8 343 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 MIS12Q9H081 205 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 HOMER3Q9NSC5 361 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GDAP2Q9NXN4 497 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CDY2AQ9Y6F7 541 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 POLR3GO15318 223 aaPredicted RBP19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 HSF2BPO75031 334 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 KRT3P12035 628 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CST5P28325 142 aaPredicted RBP19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PTPN7P35236 360 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TERF2Q15554 542 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 FBXO47Q5MNV8 452 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PAXIP1Q6ZW49 1069 aaPredicted RBP19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 LIMS2Q7Z4I7 341 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 POLNQ7Z5Q5 900 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RCOR2Q8IZ40 523 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 IQCKQ8N0W5 287 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 KLHDC9Q8NEP7 349 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 MRPL45Q9BRJ2 306 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TJP2Q9UDY2 1190 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PARP2Q9UGN5 583 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TSPAN16Q9UKR8 245 aa19.01■□□□□ 0.63
HLA-DQB1-201ENST00000374943 F8VP50 259 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SETSIPP0DME0 302 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CETN2P41208 172 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 COPS2P61201 443 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TRIM32Q13049 653 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 IPO4Q8TEX9 1081 aaKnown RBP19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 HERPUD2Q9BSE4 406 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 OSBPL8Q9BZF1 889 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 FAM129AQ9BZQ8 928 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SENP6Q9GZR1 1112 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 DPH5Q9H2P9 285 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RNF39Q9H2S5 420 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SYNCQ9H7C4 482 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 XPNPEP3Q9NQH7 507 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CHST12Q9NRB3 414 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ZDHHC18Q9NUE0 388 aa19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 DDX56Q9NY93 547 aaKnown RBP19■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GOLGA8SH3BPF8 625 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RALAP11233 206 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RFC1P35251 1148 aaPredicted RBP18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 VEGFBP49765 207 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 MGAT3Q09327 533 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SOWAHAQ2M3V2 549 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PKDCCQ504Y2 493 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ARHGAP17Q68EM7 881 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TWF2Q6IBS0 349 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SYDE1Q6ZW31 735 aaPredicted RBP18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CCDC50Q8IVM0 306 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CCDC105Q8IYK2 499 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CFHR5Q9BXR6 569 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 DCLK3Q9C098 648 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 KLK14Q9P0G3 267 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 NME7Q9Y5B8 376 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 FRMPD3Q5JV73 1810 aa18.99■□□□□ 0.63
HLA-DQB1-201ENST00000374943 OPA1O60313 960 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ECEL1O95672 775 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PFKMP08237 780 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PSMA2P25787 234 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 LRPAP1P30533 357 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms