RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 RRP12Q5JTH9 1297 aaKnown RBP5.64□□□□□ -1.51
PMS1-202ENST00000374826 FAM102AQ5T9C2 384 aaPredicted RBP5.64□□□□□ -1.51
PMS1-202ENST00000374826 RNF187Q5TA31 235 aaPredicted RBP5.64□□□□□ -1.51
PMS1-202ENST00000374826 PAPD7Q5XG87 772 aaKnown RBP5.64□□□□□ -1.51
PMS1-202ENST00000374826 METRNLQ641Q3 311 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 NECAB2Q7Z6G3 386 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 CCDC146Q8IYE0 955 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 ASB10Q8WXI3 467 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 SLC9A6Q92581 669 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 PHACTR3Q96KR7 559 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 PUS7LQ9H0K6 701 aaKnown RBP5.64□□□□□ -1.51
PMS1-202ENST00000374826 LDAHQ9H6V9 325 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 DNM3Q9UQ16 869 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 MAP3K2Q9Y2U5 619 aa5.64□□□□□ -1.51
PMS1-202ENST00000374826 USP15Q9Y4E8 981 aaPredicted RBP5.64□□□□□ -1.51
PMS1-202ENST00000374826 SCN7AQ01118 1682 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 TRIM75PA6NK02 468 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 FAM171A2A8MVW0 826 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 SPDEFO95238 335 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 GSPT1P15170 499 aaKnown RBP5.63□□□□□ -1.51
PMS1-202ENST00000374826 CHN2P52757 468 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 SEPT2Q15019 361 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 DRC7Q8IY82 874 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 CAGE1Q8TC20 777 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 CASKIN2Q8WXE0 1202 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 STON2Q8WXE9 905 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 SLC2A13Q96QE2 648 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 CAMKK2Q96RR4 588 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 NEU1Q99519 415 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 MRI1Q9BV20 369 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 ZNF277Q9NRM2 450 aaPredicted RBP5.63□□□□□ -1.51
PMS1-202ENST00000374826 TMEM140Q9NV12 185 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 TMOD3Q9NYL9 352 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 AJAP1Q9UKB5 411 aaPredicted RBP5.63□□□□□ -1.51
PMS1-202ENST00000374826 SIK3Q9Y2K2 1263 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 ATP8A1Q9Y2Q0 1164 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 FPGT-TNNI3KV9GXZ4 949 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 PNPLA7Q6ZV29 1317 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 MAPK8IP3Q9UPT6 1336 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 PALLDQ8WX93 1383 aa5.63□□□□□ -1.51
PMS1-202ENST00000374826 CCDC88AQ3V6T2 1871 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 MARCH11A6NNE9 402 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 HSP90AB1P08238 724 aaKnown RBP5.62□□□□□ -1.51
PMS1-202ENST00000374826 ATP5JP18859 108 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 FPR1P21462 350 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 ALDH1A3P47895 512 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 SLC6A9P48067 706 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 MPP3Q13368 585 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 CLUL1Q15846 466 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.62□□□□□ -1.51
PMS1-202ENST00000374826 PIGBQ92521 554 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 PLEKHF1Q96S99 279 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 SPATA5L1Q9BVQ7 753 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 RNF181Q9P0P0 153 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 TESQ9UGI8 421 aaKnown RBP5.62□□□□□ -1.51
PMS1-202ENST00000374826 ATP11BQ9Y2G3 1177 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 MAST3O60307 1309 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 SALL3Q9BXA9 1300 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 ARFGEF2Q9Y6D5 1785 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 MYH3P11055 1940 aa5.62□□□□□ -1.51
PMS1-202ENST00000374826 RNMTO43148 476 aaKnown RBP5.61□□□□□ -1.51
PMS1-202ENST00000374826 GPR32O75388 356 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 C1RP00736 705 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 BRCA1P38398 1863 aaKnown RBP5.61□□□□□ -1.51
PMS1-202ENST00000374826 IARSP41252 1262 aaKnown RBP5.61□□□□□ -1.51
PMS1-202ENST00000374826 DCTN1Q14203 1278 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 CHD4Q14839 1912 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 TXNRD1Q16881 649 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 INAVAQ3KP66 663 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 ZNF362Q5T0B9 420 aaPredicted RBP5.61□□□□□ -1.51
PMS1-202ENST00000374826 AGAP9Q5VTM2 703 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 OTUD7BQ6GQQ9 843 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 ARMC6Q6NXE6 501 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 MED25Q71SY5 747 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 MCM10Q7L590 875 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 N4BP2Q86UW6 1770 aaPredicted RBP5.61□□□□□ -1.51
PMS1-202ENST00000374826 RHOT2Q8IXI1 618 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 OR2I1PQ8NGU4 316 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 CCHCR1Q8TD31 782 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 SSH1Q8WYL5 1049 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 KIF13BQ9NQT8 1826 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 TLK1Q9UKI8 766 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 ASAP1Q9ULH1 1129 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 FRMD4BQ9Y2L6 1034 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 RRP7AQ9Y3A4 280 aaKnown RBP5.61□□□□□ -1.51
PMS1-202ENST00000374826 ACTL7AQ9Y615 435 aa5.61□□□□□ -1.51
PMS1-202ENST00000374826 ANKRD31Q8N7Z5 1873 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 LAMB2P55268 1798 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 CEMIPQ8WUJ3 1361 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 KRTAP29-1A8MX34 341 aaPredicted RBP5.6□□□□□ -1.51
PMS1-202ENST00000374826 ERVV-2B6SEH9 535 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 TEX33O43247 280 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 MT-CO1P00395 513 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 POMCP01189 267 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 IGLV2-14P01704 120 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 ERBB2P04626 1255 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 ITGAMP11215 1152 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 PCSK1P29120 753 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 TEFQ10587 303 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 PGM2L1Q6PCE3 622 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms