RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 TRAPPC3O43617 180 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 CD19P15391 556 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 LAG3P18627 525 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 PDE6CP51160 858 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 KIF11P52732 1056 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 CYP27A1Q02318 531 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 YWHAHQ04917 246 aaPredicted RBP18.66■□□□□ 0.58
C9orf43-202ENST00000374165 UNC93AQ86WB7 457 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 RNF168Q8IYW5 571 aaPredicted RBP18.66■□□□□ 0.58
C9orf43-202ENST00000374165 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.66■□□□□ 0.58
C9orf43-202ENST00000374165 FAM49BQ9NUQ9 324 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 BZW2Q9Y6E2 419 aaKnown RBP18.66■□□□□ 0.58
C9orf43-202ENST00000374165 SSU72P8A0A1W2PR75 194 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 LINC01553A4QN01 128 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 CCDC172P0C7W6 258 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 FGFR3P22607 806 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 KRT83P78385 493 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 CDR2Q01850 454 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 VARS2Q5ST30 1063 aaKnown RBP18.66■□□□□ 0.58
C9orf43-202ENST00000374165 CRYBG2Q8N1P7 616 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 SLC30A5Q8TAD4 765 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 FAM124BQ9H5Z6 455 aaPredicted RBP18.66■□□□□ 0.58
C9orf43-202ENST00000374165 CRTAC1Q9NQ79 661 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 TAS2R14Q9NYV8 317 aa18.66■□□□□ 0.58
C9orf43-202ENST00000374165 MYBPHLA2RUH7 354 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 OAZ2O95190 189 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 CA3P07451 260 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 PAEPP09466 180 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 TYMPP19971 482 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 PAX3P23760 479 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 GTF2F1P35269 517 aaKnown RBP eCLIP18.65■□□□□ 0.58
C9orf43-202ENST00000374165 LHX1P48742 406 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 PPP1R26Q5T8A7 1209 aaPredicted RBP18.65■□□□□ 0.58
C9orf43-202ENST00000374165 RSPO2Q6UXX9 243 aaPredicted RBP18.65■□□□□ 0.58
C9orf43-202ENST00000374165 LRRTM3Q86VH5 581 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 PASD1Q8IV76 773 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 B3GALNT2Q8NCR0 500 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 C17orf80Q9BSJ5 609 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 SPG21Q9NZD8 308 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 GTF3C4Q9UKN8 822 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 TFR2Q9UP52 801 aa18.65■□□□□ 0.58
C9orf43-202ENST00000374165 YBX2Q9Y2T7 364 aaKnown RBP18.65■□□□□ 0.58
C9orf43-202ENST00000374165 AKR1B10O60218 316 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 IPO7O95373 1038 aaKnown RBP18.64■□□□□ 0.58
C9orf43-202ENST00000374165 FAM163BP0C2L3 166 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 OR4Q2P0C623 313 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 BPIFB4P59827 614 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 MRPL58Q14197 206 aaKnown RBP18.64■□□□□ 0.58
C9orf43-202ENST00000374165 PRSS55Q6UWB4 352 aaPredicted RBP18.64■□□□□ 0.58
C9orf43-202ENST00000374165 TTC39CQ8N584 583 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 KLHL23Q8NBE8 558 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 TMEM169Q96HH4 297 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 DEF6Q9H4E7 631 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 TRIM10Q9UDY6 481 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 DSEQ9UL01 958 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 MTUS1Q9ULD2 1270 aa18.64■□□□□ 0.58
C9orf43-202ENST00000374165 SYN3O14994 580 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 KIF5CO60282 957 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 FGF18O76093 207 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 CCDC130P13994 396 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 PTPN1P18031 435 aaKnown RBP18.64■□□□□ 0.57
C9orf43-202ENST00000374165 METTL23Q86XA0 190 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 FMNL3Q8IVF7 1028 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 CYFIP2Q96F07 1278 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 CHST7Q9NS84 486 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 SEPT11Q9NVA2 429 aaKnown RBP18.64■□□□□ 0.57
C9orf43-202ENST00000374165 TMLHEQ9NVH6 421 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 PCDHB12Q9Y5F1 795 aa18.64■□□□□ 0.57
C9orf43-202ENST00000374165 TRIOBPQ9H2D6 2365 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 O00370 1275 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 LCA5LO95447 670 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 TNFAIP3P21580 790 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 SLC18A3Q16572 532 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 WDTC1Q8N5D0 677 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 SYT15Q9BQS2 421 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 ACBD6Q9BR61 282 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 TTPALQ9BTX7 342 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 PBX4Q9BYU1 374 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 NAGPAQ9UK23 515 aa18.63■□□□□ 0.57
C9orf43-202ENST00000374165 RCCD1A6NED2 376 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 TMCO5BA8MYB1 307 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 CLDN5O00501 218 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 C2CD2LO14523 706 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 VDRP11473 427 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 BMS1Q14692 1282 aaKnown RBP18.62■□□□□ 0.57
C9orf43-202ENST00000374165 SGO2Q562F6 1265 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 PAQR9Q6ZVX9 377 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 KIAA1328Q86T90 577 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 AUTS2Q8WXX7 1259 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 PKMYT1Q99640 499 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 L2HGDHQ9H9P8 463 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 ALG13Q9NP73 1137 aaKnown RBP18.62■□□□□ 0.57
C9orf43-202ENST00000374165 NENFQ9UMX5 172 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.62■□□□□ 0.57
C9orf43-202ENST00000374165 RPL17P18621 184 aaKnown RBP18.62■□□□□ 0.57
C9orf43-202ENST00000374165 CASQ1P31415 396 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 BMPR1AP36894 532 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 ELAVL2Q12926 359 aaKnown RBP18.62■□□□□ 0.57
C9orf43-202ENST00000374165 SPA17Q15506 151 aa18.62■□□□□ 0.57
C9orf43-202ENST00000374165 MDH1BQ5I0G3 518 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms