RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 MRPL45Q9BRJ2 306 aaKnown RBP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 ABCB6Q9NP58 842 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 AVENQ9NQS1 362 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 CEP72Q9P209 647 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 EPS15L1Q9UBC2 864 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 LIMD1Q9UGP4 676 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 GTF3C4Q9UKN8 822 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 SORCS3Q9UPU3 1222 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 MUC3AQ02505 3323 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 A8MXQ7 604 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 SOAT2O75908 522 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 FGFR1OPO95684 399 aaKnown RBP12.84□□□□□ -0.35
HDAC8-201ENST00000373554 MBD3O95983 291 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 PDGFRBP09619 1106 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 HAPLN1P10915 354 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-201ENST00000373554 LMO2P25791 158 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 CDR1P51861 262 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 MCCD1P59942 119 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-201ENST00000373554 TAF12Q16514 161 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 SLC5A9Q2M3M2 681 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 CFAP221Q4G0U5 840 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 FRMD5Q7Z6J6 570 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 FILIP1Q7Z7B0 1213 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 ITFG1Q8TB96 612 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 MYLPFQ96A32 169 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 PI4K2AQ9BTU6 479 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 C1QTNF1Q9BXJ1 281 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 NIF3L1Q9GZT8 377 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 TMLHEQ9NVH6 421 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 IGSF9Q9P2J2 1179 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 DACH1Q9UI36 760 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
HDAC8-201ENST00000373554 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 FGF19O95750 216 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 GNA14O95837 355 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 ASGR2P07307 311 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 MYL4P12829 197 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 LAMP2P13473 410 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 ATF6P18850 670 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 TRIM21P19474 475 aaKnown RBP12.83□□□□□ -0.36
HDAC8-201ENST00000373554 KCNA4P22459 653 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 ASPAP45381 313 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 RAP1GAPP47736 663 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 EPHA5P54756 1037 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 RPL10AP62906 217 aaKnown RBP12.83□□□□□ -0.36
HDAC8-201ENST00000373554 CYP27A1Q02318 531 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 CCDC142Q17RM4 750 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 PRSS36Q5K4E3 855 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 SPOPLQ6IQ16 392 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 FAM171BQ6P995 826 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 NPAS3Q8IXF0 933 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 B3GALNT2Q8NCR0 500 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 GPT2Q8TD30 523 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 ING5Q8WYH8 240 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 PSMG2Q969U7 264 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 NXPE3Q969Y0 559 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 SLC35C1Q96A29 364 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 TNIP3Q96KP6 325 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 EPHX3Q9H6B9 360 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 KCNK12Q9HB15 430 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 CRTAC1Q9NQ79 661 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDAC8-201ENST00000373554 RAB20Q9NX57 234 aa12.83□□□□□ -0.36
HDAC8-201ENST00000373554 ATP2C2O75185 946 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 MICAL2O94851 1124 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 CCDC192P0DO97 292 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 CEBPBP17676 345 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 CYP2F1P24903 491 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 CDH8P55286 799 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 DPCR1Q3MIW9 517 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 CBWD6Q4V339 395 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 WDR44Q5JSH3 913 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 CBWD3Q5JTY5 395 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 CBWD5Q5RIA9 395 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 VSTM1Q6UX27 236 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 MTSS1LQ765P7 747 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 DNAJB7Q7Z6W7 309 aaPredicted RBP12.82□□□□□ -0.36
HDAC8-201ENST00000373554 UBALD2Q8IYN6 164 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 MYCBPAPQ8TBZ2 947 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 PCED1BQ96HM7 432 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 GCNAQ96QF7 691 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 LPIN3Q9BQK8 851 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 SRRTQ9BXP5 876 aaKnown RBP12.82□□□□□ -0.36
HDAC8-201ENST00000373554 DNAI2Q9GZS0 605 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 GDE1Q9NZC3 331 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 MAGEC2Q9UBF1 373 aaPredicted RBP12.82□□□□□ -0.36
HDAC8-201ENST00000373554 ATP8B3O60423 1300 aa12.82□□□□□ -0.36
HDAC8-201ENST00000373554 CSH1P0DML2 217 aa12.81□□□□□ -0.36
HDAC8-201ENST00000373554 CSH2P0DML3 217 aa12.81□□□□□ -0.36
HDAC8-201ENST00000373554 PTPN1P18031 435 aaKnown RBP12.81□□□□□ -0.36
HDAC8-201ENST00000373554 ANXA13P27216 316 aa12.81□□□□□ -0.36
HDAC8-201ENST00000373554 CCR2P41597 374 aa12.81□□□□□ -0.36
HDAC8-201ENST00000373554 MAGEA11P43364 429 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms