RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CA12O43570 354 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 CYP3A5P20815 502 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 GPD2P43304 727 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 TM4SF4P48230 202 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 GSCP56915 257 aaPredicted RBP20.7■□□□□ 0.9
HDAC1-201ENST00000373548 SNX1Q13596 522 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 LRRC38Q5VT99 294 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 GOLGA6L1Q8N7Z2 621 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 JOSD2Q8TAC2 188 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 ARL8AQ96BM9 186 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 NT5C1AQ9BXI3 368 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 DCLK3Q9C098 648 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 KLHL11Q9NVR0 708 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 PLAAQ9Y263 795 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 R3HDM2Q9Y2K5 976 aaKnown RBP20.7■□□□□ 0.9
HDAC1-201ENST00000373548 SCN10AQ9Y5Y9 1956 aa20.7■□□□□ 0.9
HDAC1-201ENST00000373548 GOLGA8KD6RF30 607 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 ECEL1O95672 775 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 KRT14P02533 472 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 GNAT1P11488 350 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 KRT3P12035 628 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 CYBAP13498 195 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 PDCLQ13371 301 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 NME8Q8N427 588 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 LRRC52Q8N7C0 313 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 RNF25Q96BH1 459 aaPredicted RBP20.69■□□□□ 0.9
HDAC1-201ENST00000373548 MRPL45Q9BRJ2 306 aaKnown RBP20.69■□□□□ 0.9
HDAC1-201ENST00000373548 WDR35Q9P2L0 1181 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 SNX9Q9Y5X1 595 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 PLTPP55058 493 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 DHX9Q08211 1270 aaKnown RBP20.69■□□□□ 0.9
HDAC1-201ENST00000373548 TTMPQ5BVD1 217 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 TXNRD3NBQ6F5E7 133 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 DPH6Q7L8W6 267 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 UBA3Q8TBC4 463 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 FBXO25Q8TCJ0 367 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 TRIB2Q92519 343 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 TXLNGYQ9BZA5 131 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 SYNCQ9H7C4 482 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 PSD3Q9NYI0 1048 aa20.69■□□□□ 0.9
HDAC1-201ENST00000373548 GOLGA6CA6NDK9 693 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 GOLGA6DP0CG33 693 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 GABRB2P47870 512 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 NFX1Q12986 1120 aaKnown RBP20.68■□□□□ 0.9
HDAC1-201ENST00000373548 ZNF268Q14587 947 aaPredicted RBP20.68■□□□□ 0.9
HDAC1-201ENST00000373548 C9orf57Q5W0N0 161 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 LCLAT1Q6UWP7 414 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 ZNF771Q7L3S4 317 aaPredicted RBP20.68■□□□□ 0.9
HDAC1-201ENST00000373548 RCOR2Q8IZ40 523 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 RNF39Q9H2S5 420 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 GOLGA6AQ9NYA3 693 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 KLK14Q9P0G3 267 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 KIAA1257Q9ULG3 409 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 UBQLN1Q9UMX0 589 aaKnown RBP20.68■□□□□ 0.9
HDAC1-201ENST00000373548 GABRQQ9UN88 632 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 PI4K2BG5E9Z4 385 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 H0YGN5 161 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 PPFIA2O75334 1257 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 KRT1P04264 644 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 PSMC4P43686 418 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 GJA9P57773 515 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 GNASQ5JWF2 1037 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 C12orf29Q8N999 325 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 MCRS1Q96EZ8 462 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 RBM41Q96IZ5 413 aaKnown RBP20.68■□□□□ 0.9
HDAC1-201ENST00000373548 SLITRK1Q96PX8 696 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 METTL5Q9NRN9 209 aaKnown RBP20.68■□□□□ 0.9
HDAC1-201ENST00000373548 TSPAN16Q9UKR8 245 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 ABT1Q9ULW3 272 aaKnown RBP20.68■□□□□ 0.9
HDAC1-201ENST00000373548 NME7Q9Y5B8 376 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 NFS1Q9Y697 457 aa20.68■□□□□ 0.9
HDAC1-201ENST00000373548 SMIM28A0A1B0GU29 152 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 KPNA6O60684 536 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 PSMA2P25787 234 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 GBP1P32455 592 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 FCGRTP55899 365 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 KRT17Q04695 432 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 MTMR3Q13615 1198 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 XKR4Q5GH76 650 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 LRIG3Q6UXM1 1119 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 FNIP1Q8TF40 1166 aa20.67■□□□□ 0.9
HDAC1-201ENST00000373548 UBLCP1Q8WVY7 318 aaPredicted RBP20.67■□□□□ 0.9
HDAC1-201ENST00000373548 MTG1Q9BT17 334 aaPredicted RBP20.67■□□□□ 0.9
HDAC1-201ENST00000373548 PPP1R7Q15435 360 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 TAF2Q6P1X5 1199 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 MFSD7Q6UXD7 560 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 ARFGAP1Q8N6T3 406 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 EMC1Q8N766 993 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 PARP2Q9UGN5 583 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 PGK1P00558 417 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 PFKMP08237 780 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 KCNE1P15382 129 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 ADCY2Q08462 1091 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 ZFYVE27Q5T4F4 411 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 MFSD14CQ5VZR4 134 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 CXCL17Q6UXB2 119 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 ACOT1Q86TX2 421 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 FAM228AQ86W67 206 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 SMG8Q8ND04 991 aaKnown RBP20.66■□□□□ 0.9
HDAC1-201ENST00000373548 HOMER3Q9NSC5 361 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms