RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 XXYLT1Q8NBI6 393 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 AFG1LQ8WV93 481 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 COPS5Q92905 334 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 SLC7A6OSQ96CW6 309 aaPredicted RBP11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 BTBD6Q96KE9 485 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 IKZF4Q9H2S9 585 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
RPRD1B-201ENST00000373433 ATP2A1O14983 1001 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 TRPA1O75762 1119 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 TTC4O95801 387 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 YY1P25490 414 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 SLC12A3P55017 1021 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 ACVR2BQ13705 512 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 PPP2R5DQ14738 602 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 SGO2Q562F6 1265 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 GJC2Q5T442 439 aaPredicted RBP11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 FOXB2Q5VYV0 432 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 DSTYKQ6XUX3 929 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 CPNE8Q86YQ8 564 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 CCDC60Q8IWA6 550 aaPredicted RBP11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 CCDC77Q9BR77 488 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 UBN1Q9NPG3 1134 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 TTLL3Q9Y4R7 772 aa11.77□□□□□ -0.52
RPRD1B-201ENST00000373433 SYNJ2BP-COX16A0A087WUM0 186 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 FAM47DPA6NHR8 397 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 MIF4GDA9UHW6 222 aaKnown RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 PDXKO00764 312 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 LMNAP02545 664 aaKnown RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 FTLP02792 175 aaPredicted RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 KRT15P19012 456 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 ADCYAP1R1P41586 468 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 SOX10P56693 466 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 KCNA1Q09470 495 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 FAM110CQ1W6H9 321 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 ENDOVQ8N8Q3 282 aaKnown RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 ATG4AQ8WYN0 398 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 ABHD16BQ9H3Z7 469 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 COX16Q9P0S2 106 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 NENFQ9UMX5 172 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 RP1L1Q8IWN7 2480 aaPredicted RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 ADAMTSL1Q8N6G6 1762 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 WDR91A4D1P6 747 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 POC1B-GALNT4F8VUJ3 575 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 CLDN3O15551 220 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 CDH16O75309 829 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 ADCY8P40145 1251 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 PSMC4P43686 418 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 ITGA8P53708 1063 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 YARSP54577 528 aaKnown RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 WDR4P57081 412 aaKnown RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 SLC13A5Q86YT5 568 aaPredicted RBP11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 C4orf33Q8N1A6 199 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 VPS52Q8N1B4 723 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 SPIRE2Q8WWL2 714 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 TIPINQ9BVW5 301 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 NPHS2Q9NP85 383 aa11.77□□□□□ -0.53
RPRD1B-201ENST00000373433 GSTA2P09210 222 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 TRIM49P0CI25 452 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 TRIM49CP0CI26 452 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 T-ENOLP0DO92 83 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 KPNB1Q14974 876 aaKnown RBP11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 MTDHQ86UE4 582 aaKnown RBP11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 RHOT2Q8IXI1 618 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 THNSL1Q8IYQ7 743 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 SLC30A5Q8TAD4 765 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 SLC20A1Q8WUM9 679 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 TRAPPC9Q96Q05 1148 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 AAASQ9NRG9 546 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 USP20Q9Y2K6 914 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 KIAA1551Q9HCM1 1747 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 CFAP69A5D8W1 941 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 SPATA31C2B4DYI2 1134 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 ALDH1A1P00352 501 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 ETS2P15036 469 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 GNASQ5JWF2 1037 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 HP1BP3Q5SSJ5 553 aaPredicted RBP11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 LRRC74BQ6ZQY2 392 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 GSTA5Q7RTV2 222 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 SENP7Q9BQF6 1050 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 MSTO1Q9BUK6 570 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 BCAS3Q9H6U6 928 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 LAMB1P07942 1786 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 MAP3K7O43318 606 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 TJP3O95049 919 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 CA4P22748 312 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 PTPN4P29074 926 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 MYL7Q01449 175 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 NOGQ13253 232 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 TAF12Q16514 161 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 FAM136AQ96C01 138 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 BORCS6Q96GS4 357 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 NDNQ99608 321 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 FAM213AQ9BRX8 229 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 TINF2Q9BSI4 451 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 ANAPC5Q9UJX4 755 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 PCDHA3Q9Y5H8 950 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 DLEC1Q9Y238 1755 aa11.76□□□□□ -0.53
RPRD1B-201ENST00000373433 hCG_2014768A0A024R1R8 64 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms