RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ZNF662Q6ZS27 426 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 SETD3Q86TU7 594 aaPredicted RBP10.95□□□□□ -0.66
NUP188-201ENST00000372577 TAS1R2Q8TE23 839 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 SLC35C1Q96A29 364 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 AVENQ9NQS1 362 aaPredicted RBP10.95□□□□□ -0.66
NUP188-201ENST00000372577 PIK3C2AO00443 1686 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 STRNO43815 780 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 STAG3L1P0CL83 205 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 STMN1P16949 149 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 PTENP60484 403 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 PSMC6P62333 389 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 ILF2Q12905 390 aaKnown RBP10.94□□□□□ -0.66
NUP188-201ENST00000372577 HIC1Q14526 733 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 MAP4K3Q8IVH8 894 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 PTPRN2Q92932 1015 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 MTBPQ96DY7 904 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 ARHGEF38Q9NXL2 777 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 RAB21Q9UL25 225 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 KCNJ1P48048 391 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 SPDYCQ5MJ68 293 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 NBPF12Q5TAG4 269 aaPredicted RBP10.94□□□□□ -0.66
NUP188-201ENST00000372577 DDX42Q86XP3 938 aaKnown RBP eCLIP10.94□□□□□ -0.66
NUP188-201ENST00000372577 ZDHHC17Q8IUH5 632 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
NUP188-201ENST00000372577 CYFIP2Q96F07 1278 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 ASB7Q9H672 318 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 VTA1Q9NP79 307 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 BNIP3LO60238 219 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 IFNA8P32881 189 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 PTK6Q13882 451 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 MYO1DO94832 1006 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 KRT16P08779 473 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 CYP4A22Q5TCH4 519 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 EP400NLQ6ZTU2 488 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 TRPM8Q7Z2W7 1104 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 STAMBPL1Q96FJ0 436 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 PACSIN1Q9BY11 444 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 TMBIM4Q9HC24 238 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 DUSP10Q9Y6W6 482 aa10.94□□□□□ -0.66
NUP188-201ENST00000372577 UBA6A0AVT1 1052 aaPredicted RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 WNT10BO00744 389 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PLA2G6O60733 806 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 CNTFP26441 200 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PRKCIP41743 596 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 CTCFP49711 727 aaPredicted RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 HUNKP57058 714 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 LAMTOR4Q0VGL1 99 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 NBPF20Q3BBV1 942 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 EPC2Q52LR7 807 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 ICE2Q659A1 982 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 EFL1Q7Z2Z2 1120 aaKnown RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 RNF180Q86T96 592 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 CMTM5Q96DZ9 223 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 TMEM176AQ96HP8 235 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 YY1AP1Q9H869 796 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 POLIQ9UNA4 740 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 TFR2Q9UP52 801 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 VPS9D1Q9Y2B5 631 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 CDY2AQ9Y6F7 541 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 CDY1Q9Y6F8 540 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 H2AFYO75367 372 aaKnown RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 CTSHP09668 335 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 IL1RL1Q01638 556 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 GNASQ5JWF2 1037 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 ATP6V0D2Q8N8Y2 350 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 OR2W6PQ8NHA6 318 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 N4BP2L2Q92802 583 aaPredicted RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 EGFL8Q99944 293 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 CISHQ9NSE2 258 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 SPATS2LQ9NUQ6 558 aaKnown RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 AXLP30530 894 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PHEXP78562 749 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 USP10Q14694 798 aaKnown RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 FAM71DQ8N9W8 422 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 SNX19Q92543 992 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 TBCBQ99426 244 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 MAF1Q9H063 256 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 SLC24A2Q9UI40 661 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 TTC36A6NLP5 189 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 MYL2P10916 166 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PGM1P36871 562 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PTGER2P43116 358 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 LHX1P48742 406 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PTPN11Q06124 597 aaPredicted RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 SPOCD1Q6ZMY3 1216 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 NUDT18Q6ZVK8 323 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 TAS2R42Q7RTR8 314 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PIP4K2CQ8TBX8 421 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 SMYD3Q9H7B4 428 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PRDM16Q9HAZ2 1276 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 RRN3Q9NYV6 651 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 SLC13A4Q9UKG4 626 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 MED1Q15648 1581 aaPredicted RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 GRAP2O75791 330 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 PYGLP06737 847 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 RFC1P35251 1148 aaPredicted RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 ALDH5A1P51649 535 aaPredicted RBP10.93□□□□□ -0.66
NUP188-201ENST00000372577 CLCN3P51790 818 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 GEMP55040 296 aa10.93□□□□□ -0.66
NUP188-201ENST00000372577 KRT33BQ14525 404 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms