RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ZNF560Q96MR9 790 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 FAM153AQ9UHL3 310 aa26.42■■□□□ 1.82
CTSA-203ENST00000372459 SIGLEC16A6NMB1 481 aa26.41■■□□□ 1.82
CTSA-203ENST00000372459 GPD2P43304 727 aa26.41■■□□□ 1.82
CTSA-203ENST00000372459 ZNF252P-AS1Q0IIN9 211 aa26.41■■□□□ 1.82
CTSA-203ENST00000372459 ZNF268Q14587 947 aaPredicted RBP26.41■■□□□ 1.82
CTSA-203ENST00000372459 CCDC137Q6PK04 289 aaKnown RBP26.41■■□□□ 1.82
CTSA-203ENST00000372459 DPH6Q7L8W6 267 aa26.41■■□□□ 1.82
CTSA-203ENST00000372459 SERINC5Q86VE9 423 aa26.41■■□□□ 1.82
CTSA-203ENST00000372459 DDX42Q86XP3 938 aaKnown RBP eCLIP26.41■■□□□ 1.82
CTSA-203ENST00000372459 NIPA2Q8N8Q9 360 aa26.41■■□□□ 1.82
CTSA-203ENST00000372459 MRPL45Q9BRJ2 306 aaKnown RBP26.41■■□□□ 1.82
CTSA-203ENST00000372459 TRIM51Q9BSJ1 452 aa26.41■■□□□ 1.82
CTSA-203ENST00000372459 PIRO00625 290 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 DAPK3O43293 454 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 ASGR1P07306 291 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 KRT3P12035 628 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 ECHS1P30084 290 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 CCND3P30281 292 aaPredicted RBP26.4■■□□□ 1.82
CTSA-203ENST00000372459 PNPLA4P41247 253 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 FNTAP49354 379 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 FBXO47Q5MNV8 452 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 JAMLQ86YT9 394 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 EXD1Q8NHP7 514 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 ERP44Q9BS26 406 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 RNF19AQ9NV58 838 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 GOLGA6BA6NDN3 693 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 GOLGA8SH3BPF8 625 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 RPS6KA5O75582 802 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 PRKAR2AP13861 404 aaKnown RBP26.4■■□□□ 1.82
CTSA-203ENST00000372459 CYP3A5P20815 502 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 COILP38432 576 aaPredicted RBP26.4■■□□□ 1.82
CTSA-203ENST00000372459 GABRB2P47870 512 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 OGDHQ02218 1023 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 PDCLQ13371 301 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 XYLT1Q86Y38 959 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 CCDC50Q8IVM0 306 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 MREGQ8N565 214 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 LRRC19Q9H756 370 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 RNF186Q9NXI6 227 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 TJP2Q9UDY2 1190 aa26.4■■□□□ 1.82
CTSA-203ENST00000372459 PODXLO00592 558 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 ERBB2P04626 1255 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 CAP1Q01518 475 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 KCNA10Q16322 511 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 LRRC38Q5VT99 294 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 TTC27Q6P3X3 843 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 SESTD1Q86VW0 696 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 UNC93AQ86WB7 457 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 KLHDC9Q8NEP7 349 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 CAPNS2Q96L46 248 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 TSPAN16Q9UKR8 245 aa26.39■■□□□ 1.82
CTSA-203ENST00000372459 F8VP50 259 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 PTGIRP43119 386 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 DEFB115Q30KQ5 88 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 DUPD1Q68J44 220 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 RPAINQ86UA6 219 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 CCDC105Q8IYK2 499 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 TSEN2Q8NCE0 465 aaKnown RBP26.38■■□□□ 1.81
CTSA-203ENST00000372459 UBA3Q8TBC4 463 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 IPO4Q8TEX9 1081 aaKnown RBP26.38■■□□□ 1.81
CTSA-203ENST00000372459 FNIP1Q8TF40 1166 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 SENP6Q9GZR1 1112 aaPredicted RBP26.38■■□□□ 1.81
CTSA-203ENST00000372459 MIS12Q9H081 205 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 DPH5Q9H2P9 285 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 ST3GAL5Q9UNP4 418 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 MYCNP04198 464 aaPredicted RBP26.38■■□□□ 1.81
CTSA-203ENST00000372459 ELNP15502 786 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 GJC1P36383 396 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 CETN2P41208 172 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 ALS2CLQ60I27 953 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 WNT8BQ93098 351 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 VPS18Q9P253 973 aa26.38■■□□□ 1.81
CTSA-203ENST00000372459 KPNA7A9QM74 516 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 HSF2BPO75031 334 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 CTSHP09668 335 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 CST5P28325 142 aaPredicted RBP26.37■■□□□ 1.81
CTSA-203ENST00000372459 RFC1P35251 1148 aaPredicted RBP26.37■■□□□ 1.81
CTSA-203ENST00000372459 LLGL1Q15334 1064 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 SOWAHAQ2M3V2 549 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 ARRDC4Q8NCT1 418 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 OR6B3Q8NGW1 331 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 RBM41Q96IZ5 413 aaKnown RBP26.37■■□□□ 1.81
CTSA-203ENST00000372459 TRIM31Q9BZY9 425 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 CHST12Q9NRB3 414 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 GDAP2Q9NXN4 497 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 TOMM70O94826 608 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 CHRNA1P02708 482 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 PSMA2P25787 234 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 TAF6P49848 677 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 DRG2P55039 364 aaKnown RBP26.37■■□□□ 1.81
CTSA-203ENST00000372459 NFX1Q12986 1120 aaKnown RBP26.37■■□□□ 1.81
CTSA-203ENST00000372459 GOLGA7BQ2TAP0 167 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 ACOT1Q86TX2 421 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 RCOR2Q8IZ40 523 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 C12orf29Q8N999 325 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 ZBTB9Q96C00 473 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 MCRS1Q96EZ8 462 aa26.37■■□□□ 1.81
CTSA-203ENST00000372459 METTL5Q9NRN9 209 aaKnown RBP26.37■■□□□ 1.81
CTSA-203ENST00000372459 RALAP11233 206 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms