RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 RIPK3Q9Y572 518 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 A6NJR5 290 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 HOXC6P09630 235 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 CYP2C9P11712 490 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 PSMA2P25787 234 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 ADORA2AP29274 412 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 HNRNPH3P31942 346 aaKnown RBP10.55□□□□□ -0.72
KDM4A-201ENST00000372396 COPS2P61201 443 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 NFX1Q12986 1120 aaKnown RBP10.55□□□□□ -0.72
KDM4A-201ENST00000372396 DCAF4L1Q3SXM0 396 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 CCDC14Q49A88 953 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 CELF3Q5SZQ8 465 aaKnown RBP10.55□□□□□ -0.72
KDM4A-201ENST00000372396 KAZNQ674X7 775 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 CD302Q8IX05 232 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 SDR16C5Q8N3Y7 309 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 SMYD1Q8NB12 490 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 OSBPL10Q9BXB5 764 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
KDM4A-201ENST00000372396 GGT7Q9UJ14 662 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 TMA7Q9Y2S6 64 aaKnown RBP10.55□□□□□ -0.72
KDM4A-201ENST00000372396 SNCAIPQ9Y6H5 919 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 ATP8B3O60423 1300 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 RPTORQ8N122 1335 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 TMEM150BA6NC51 233 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 ADCY3O60266 1144 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 KDM1AO60341 852 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 GZMAP12544 262 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 NCKAP1LP55160 1127 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 TMEM62Q0P6H9 643 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 LAMTOR4Q0VGL1 99 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 CUL2Q13617 745 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 RHOT1Q8IXI2 618 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 CCT6BQ92526 530 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 UPF1Q92900 1129 aaKnown RBP eCLIP10.55□□□□□ -0.729e-11■■■■■ 77.1
KDM4A-201ENST00000372396 TEPSINQ96N21 525 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
KDM4A-201ENST00000372396 XPO6Q96QU8 1125 aaKnown RBP10.55□□□□□ -0.72
KDM4A-201ENST00000372396 LACRTQ9GZZ8 138 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 NKIRAS1Q9NYS0 192 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 SLC4A7Q9Y6M7 1214 aa10.55□□□□□ -0.72
KDM4A-201ENST00000372396 FAM187AA6NFU0 413 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 HUS1O60921 280 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 UBTFL6P0CB48 400 aaPredicted RBP10.54□□□□□ -0.72
KDM4A-201ENST00000372396 CHRNA3P32297 505 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ICAM3P32942 547 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 VPS41P49754 854 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 KCNA1Q09470 495 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ZNF268Q14587 947 aaPredicted RBP10.54□□□□□ -0.72
KDM4A-201ENST00000372396 TAF12Q16514 161 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 WDR72Q3MJ13 1102 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ZNF662Q6ZS27 426 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.54□□□□□ -0.72
KDM4A-201ENST00000372396 RFX6Q8HWS3 928 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 TSEN2Q8NCE0 465 aaKnown RBP10.54□□□□□ -0.72
KDM4A-201ENST00000372396 REPS2Q8NFH8 660 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 TMEM117Q9H0C3 514 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ABHD16BQ9H3Z7 469 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PACSIN2Q9UNF0 486 aaPredicted RBP10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ZNF510Q9Y2H8 683 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ZNF185O15231 689 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PJA2O43164 708 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 CYP2C8P10632 490 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 KCNJ2P63252 427 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 CDR2Q01850 454 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ANO7Q6IWH7 933 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ZNF571Q7Z3V5 609 aaPredicted RBP10.54□□□□□ -0.72
KDM4A-201ENST00000372396 WDR49Q8IV35 697 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 MMGT1Q8N4V1 131 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 TMEM161BQ8NDZ6 487 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■□□□ 14.5
KDM4A-201ENST00000372396 CAVIN3Q969G5 261 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 LRRC4Q9HBW1 653 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 GTF3C4Q9UKN8 822 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PRPSAP2O60256 369 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 TJP3O95049 919 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 EGFRP00533 1210 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 VHLP40337 213 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 CLCN3P51790 818 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ITGA7Q13683 1181 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ZCWPW2Q504Y3 356 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 TMEM139Q8IV31 216 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 AFG1LQ8WV93 481 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 MCUR1Q96AQ8 359 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PARVBQ9HBI1 364 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ASNSD1Q9NWL6 643 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 CROTQ9UKG9 612 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 M0QYV0 167 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 RGS16O15492 202 aaPredicted RBP10.54□□□□□ -0.72
KDM4A-201ENST00000372396 S100A1P23297 94 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 NFKBIAP25963 317 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PRKCIP41743 596 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 ABL2P42684 1182 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PEX5P50542 639 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 SOX10P56693 466 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 SPIRE1Q08AE8 756 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PSMD6Q15008 389 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 SV2AQ7L0J3 742 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 PLPPR4Q7Z2D5 763 aa10.54□□□□□ -0.72
KDM4A-201ENST00000372396 TPCN2Q8NHX9 752 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms